RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 RHODO00212 210 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 PTPRBP23467 1997 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 KNCNA6PVL3 124 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 IGLL5B9A064 214 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 CFC1P0CG37 223 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 PPIFP30405 207 aaKnown RBP7.87□□□□□ -1.15
UFD1-205ENST00000459854 ZNF726P1Q15940 193 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 Q6ZVH6 145 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 ZNF747Q9BV97 191 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 COL6A3P12111 3177 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 IGKV1-27A0A075B6S5 117 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 PAX9P55771 341 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 Q8NA96 180 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 IGHV3-64A0A075B6Q5 118 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 MRPL23Q16540 153 aaKnown RBP7.87□□□□□ -1.15
UFD1-205ENST00000459854 Q6P435 159 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 NTN5Q8WTR8 489 aaPredicted RBP7.87□□□□□ -1.15
UFD1-205ENST00000459854 MED13Q9UHV7 2174 aa7.87□□□□□ -1.15
UFD1-205ENST00000459854 IGHV3-66A0A0C4DH42 116 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 A0A1B0GUS0 222 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 IGKV3-20P01619 116 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 SCRT2Q9NQ03 307 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 A0A0C4DFX4 3053 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 WDR87Q6ZQQ6 2873 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 IGHV3OR16-13A0A075B7E8 117 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 IGHV3-74A0A0B4J1X5 117 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 IGHV3-23P01764 117 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 NPC2P61916 151 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 MRPL51Q4U2R6 128 aaKnown RBP7.86□□□□□ -1.15
UFD1-205ENST00000459854 MINOS1Q5TGZ0 78 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 SSC4DQ8WTU2 575 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 MINOS1-NBL1R4GNA1 71 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 IGHV3-35A0A0C4DH35 117 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 IGHV1-2P23083 117 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 Q71RC1 249 aaPredicted RBP7.86□□□□□ -1.15
UFD1-205ENST00000459854 IGKV3D-20A0A0C4DH25 116 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 TIMM23O14925 209 aa7.86□□□□□ -1.15
UFD1-205ENST00000459854 FER1L5A0AVI2 2057 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 A0A0G2JNJ9 132 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 A0A0G2JRQ6 117 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 PRSS47A8MTI9 375 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 H0YJW9 148 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 Q6ZRM9 215 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 Q9UFV3 132 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 DNAJC13O75165 2243 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 UNC80Q8N2C7 3258 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 A0A1W2PPI3 338 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 PRB1P04280 392 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 TP53TG1Q9Y2A0 90 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 NDUFS7O75251 213 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 WNT2P09544 360 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 PLAURQ03405 335 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 TMEM14BQ9NUH8 114 aa7.85□□□□□ -1.15
UFD1-205ENST00000459854 IGHV1-69DA0A0B4J2H0 117 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 I3L3M4 83 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 RCHY1Q96PM5 261 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 FOXI1Q12951 378 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 HAPLN4Q86UW8 402 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 ZNF837Q96EG3 531 aaPredicted RBP7.84□□□□□ -1.15
UFD1-205ENST00000459854 CHCHD5Q9BSY4 110 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 SPANXB1Q9NS25 103 aaPredicted RBP7.84□□□□□ -1.15
UFD1-205ENST00000459854 ESPL1Q14674 2120 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 IGHV3-49A0A0A0MS15 119 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 TRGV4A0A0C4DH28 118 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 J3QQQ9 107 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 TAX1BP3O14907 124 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 FAM27E3Q08E93 113 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 STHQ8IWL8 128 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 ITLN2Q8WWU7 325 aaPredicted RBP7.84□□□□□ -1.15
UFD1-205ENST00000459854 SMIM2Q9BVW6 85 aa7.84□□□□□ -1.15
UFD1-205ENST00000459854 MRPL35Q9NZE8 188 aaKnown RBP7.84□□□□□ -1.15
UFD1-205ENST00000459854 FAM223BA6NKX1 122 aa7.84□□□□□ -1.16
UFD1-205ENST00000459854 CFHR2P36980 270 aa7.84□□□□□ -1.16
UFD1-205ENST00000459854 FAM223AQ8IWN6 122 aa7.84□□□□□ -1.16
UFD1-205ENST00000459854 C14orf178Q8N769 122 aaPredicted RBP7.84□□□□□ -1.16
UFD1-205ENST00000459854 SPXQ9BT56 116 aa7.84□□□□□ -1.16
UFD1-205ENST00000459854 SELENOKQ9Y6D0 94 aa7.84□□□□□ -1.16
UFD1-205ENST00000459854 ADAMTS20P59510 1910 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 FOXG1P55316 489 aaPredicted RBP7.83□□□□□ -1.16
UFD1-205ENST00000459854 VWC2Q2TAL6 325 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 USMG5Q96IX5 58 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 ANKRD11Q6UB99 2663 aaPredicted RBP7.83□□□□□ -1.16
UFD1-205ENST00000459854 TRBV19A0A075B6N1 114 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 LINC00473A8K010 186 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.83□□□□□ -1.16
UFD1-205ENST00000459854 WISP1O95388 367 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 HS3ST6Q96QI5 342 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 SPATA25Q9BR10 227 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 TMEM243Q9BU79 118 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 MCRIP2Q9BUT9 160 aaKnown RBP7.83□□□□□ -1.16
UFD1-205ENST00000459854 ZNF292O60281 2723 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 TRAV26-1A0A087WT03 109 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 DSCR8Q96T75 97 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 NDUFA12Q9UI09 145 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms