RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 K7EQG2 157 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 KCNIP4Q6PIL6 250 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 COX8CQ7Z4L0 72 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 PRR25Q96S07 402 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 NSUN5P1Q3KNT7 163 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 C9orf47Q6ZRZ4 202 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 DYNLRB2Q8TF09 96 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 ZC2HC1AQ96GY0 325 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 NDFIP1Q9BT67 221 aa18.38■□□□□ 0.53
U2AF1-204ENST00000459639 SETD2Q9BYW2 2564 aaPredicted RBP18.37■□□□□ 0.53
U2AF1-204ENST00000459639 ERCC8Q13216 396 aa18.37■□□□□ 0.53
U2AF1-204ENST00000459639 NUDT10Q8NFP7 164 aa18.37■□□□□ 0.53
U2AF1-204ENST00000459639 Q8TAT8 98 aa18.37■□□□□ 0.53
U2AF1-204ENST00000459639 NUDT11Q96G61 164 aa18.37■□□□□ 0.53
U2AF1-204ENST00000459639 SIGLEC8Q9NYZ4 499 aa18.37■□□□□ 0.53
U2AF1-204ENST00000459639 IL36BQ9NZH7 164 aa18.37■□□□□ 0.53
U2AF1-204ENST00000459639 C19orf71A6NCJ1 209 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 PAFAH1B2P68402 229 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 TMEM78Q5T7P6 136 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 WFDC3Q8IUB2 231 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 C8orf49Q96NF6 230 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 ASCL2Q99929 193 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 AGPAT4-IT1Q9H0P7 198 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 PPP1R14DQ9NXH3 145 aa18.36■□□□□ 0.53
U2AF1-204ENST00000459639 TRBV24-1A0A075B6N3 115 aa18.35■□□□□ 0.53
U2AF1-204ENST00000459639 TGIF2-C20orf24A0A0A6YYL0 155 aa18.35■□□□□ 0.53
U2AF1-204ENST00000459639 TRAV2A0A0B4J234 112 aa18.35■□□□□ 0.53
U2AF1-204ENST00000459639 ZNF705GA8MUZ8 300 aaPredicted RBP18.35■□□□□ 0.53
U2AF1-204ENST00000459639 GATCO43716 136 aaKnown RBP18.35■□□□□ 0.53
U2AF1-204ENST00000459639 LINC00322Q6ZN03 302 aaPredicted RBP18.35■□□□□ 0.53
U2AF1-204ENST00000459639 CXCL1P09341 107 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 CT45A10P0DMU9 189 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 ZNF138P52744 262 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 SNRPD3P62318 126 aaKnown RBP18.34■□□□□ 0.53
U2AF1-204ENST00000459639 OR10J6PQ8NGY7 276 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 NPIPB6E9PJ23 425 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 RAB5AP20339 215 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 TFPI2P48307 235 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 DAZAP1Q96EP5 407 aaKnown RBP18.34■□□□□ 0.53
U2AF1-204ENST00000459639 PYGO2Q9BRQ0 406 aa18.34■□□□□ 0.53
U2AF1-204ENST00000459639 P01737 135 aa18.33■□□□□ 0.52
U2AF1-204ENST00000459639 DEFB114Q30KQ6 69 aa18.33■□□□□ 0.52
U2AF1-204ENST00000459639 RBPMS2Q6ZRY4 209 aaKnown RBP18.33■□□□□ 0.52
U2AF1-204ENST00000459639 GPR61Q9BZJ8 451 aa18.33■□□□□ 0.52
U2AF1-204ENST00000459639 TMEM61Q8N0U2 210 aa18.32■□□□□ 0.52
U2AF1-204ENST00000459639 OR8A1Q8NGG7 326 aa18.32■□□□□ 0.52
U2AF1-204ENST00000459639 LINC00477Q96M19 166 aa18.32■□□□□ 0.52
U2AF1-204ENST00000459639 RPP21Q9H633 154 aaKnown RBP18.32■□□□□ 0.52
U2AF1-204ENST00000459639 LENEPQ9Y5L5 61 aa18.32■□□□□ 0.52
U2AF1-204ENST00000459639 TRAV9-1A0A075B6T8 112 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 A0A1W2PPQ1 181 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 CT83Q5H943 113 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 OR4B1Q8NGF8 309 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 BTF3L4Q96K17 158 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 FAM210BQ96KR6 192 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 ZNF688P0C7X2 276 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 FAM3BP58499 235 aaPredicted RBP18.31■□□□□ 0.52
U2AF1-204ENST00000459639 SMUG1Q53HV7 270 aa18.31■□□□□ 0.52
U2AF1-204ENST00000459639 TMA7Q9Y2S6 64 aaKnown RBP18.31■□□□□ 0.52
U2AF1-204ENST00000459639 TRAV25A0A0B4J276 109 aa18.3■□□□□ 0.52
U2AF1-204ENST00000459639 CRIP1P50238 77 aa18.3■□□□□ 0.52
U2AF1-204ENST00000459639 SMIM27A0A1W2PRY6 76 aa18.29■□□□□ 0.52
U2AF1-204ENST00000459639 HIST1H1AQ02539 215 aaPredicted RBP18.29■□□□□ 0.52
U2AF1-204ENST00000459639 PSMG4Q5JS54 123 aa18.29■□□□□ 0.52
U2AF1-204ENST00000459639 FAM162BQ5T6X4 162 aa18.29■□□□□ 0.52
U2AF1-204ENST00000459639 ZNF705DP0CH99 300 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-204ENST00000459639 ZNF705BP0CI00 300 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-204ENST00000459639 CD300EQ496F6 205 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-204ENST00000459639 WNK1Q9H4A3 2382 aa18.28■□□□□ 0.52
U2AF1-204ENST00000459639 F6UB75 175 aa18.28■□□□□ 0.52
U2AF1-204ENST00000459639 CA1P00915 261 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-204ENST00000459639 DEFB1P60022 68 aa18.28■□□□□ 0.52
U2AF1-204ENST00000459639 TSKUQ8WUA8 353 aa18.28■□□□□ 0.52
U2AF1-204ENST00000459639 SPAG8Q99932 426 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-204ENST00000459639 CITED1Q99966 193 aa18.28■□□□□ 0.52
U2AF1-204ENST00000459639 TRBV7-9A0A0J9YWB2 115 aa18.26■□□□□ 0.51
U2AF1-204ENST00000459639 A8MWL6 223 aa18.26■□□□□ 0.51
U2AF1-204ENST00000459639 SH2D1AO60880 128 aa18.26■□□□□ 0.51
U2AF1-204ENST00000459639 PF4P02776 101 aa18.26■□□□□ 0.51
U2AF1-204ENST00000459639 TYMSP04818 313 aa18.26■□□□□ 0.51
U2AF1-204ENST00000459639 ZNF80P51504 273 aaPredicted RBP18.25■□□□□ 0.51
U2AF1-204ENST00000459639 OR4C46A6NHA9 309 aa18.25■□□□□ 0.51
U2AF1-204ENST00000459639 RPS10P46783 165 aaKnown RBP18.25■□□□□ 0.51
U2AF1-204ENST00000459639 OR2D3Q8NGH3 330 aa18.25■□□□□ 0.51
U2AF1-204ENST00000459639 FAM19A4Q96LR4 140 aa18.25■□□□□ 0.51
U2AF1-204ENST00000459639 GFRA4Q9GZZ7 299 aa18.25■□□□□ 0.51
U2AF1-204ENST00000459639 TCL1AP56279 114 aa18.24■□□□□ 0.51
U2AF1-204ENST00000459639 A0A0J9YX75 114 aa18.23■□□□□ 0.51
U2AF1-204ENST00000459639 FABP5P3A8MUU1 101 aa18.23■□□□□ 0.51
U2AF1-204ENST00000459639 SAP30O75446 220 aa18.23■□□□□ 0.51
U2AF1-204ENST00000459639 LINC00482Q8N8I6 264 aa18.23■□□□□ 0.51
U2AF1-204ENST00000459639 SRD5A3Q9H8P0 318 aa18.23■□□□□ 0.51
U2AF1-204ENST00000459639 NAT8BQ9UHF3 227 aa18.23■□□□□ 0.51
U2AF1-204ENST00000459639 FAM231BA6NCW3 169 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 EBLN2Q6P2I7 272 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 FOXI2Q6ZQN5 318 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 NEU1Q99519 415 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 SAV1Q9H4B6 383 aaPredicted RBP18.22■□□□□ 0.51
U2AF1-204ENST00000459639 IZUMO1RA6ND01 250 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 RPL19P84098 196 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms