RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 LINC00477Q96M19 166 aa7.09□□□□□ -1.27
HDLBP-227ENST00000458564 SRRQ9GZT4 340 aa7.09□□□□□ -1.27
HDLBP-227ENST00000458564 FLVCR2Q9UPI3 526 aa7.09□□□□□ -1.27
HDLBP-227ENST00000458564 PRELID1Q9Y255 219 aa7.09□□□□□ -1.27
HDLBP-227ENST00000458564 KLF12Q9Y4X4 402 aa7.09□□□□□ -1.27
HDLBP-227ENST00000458564 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 MPDU1O75352 247 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 NDUFB4O95168 129 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 IFNA5P01569 189 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 CRYBA4P53673 196 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 BTN1A1Q13410 526 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 ICAM4Q14773 271 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 MRPL23Q16540 153 aaKnown RBP7.08□□□□□ -1.28
HDLBP-227ENST00000458564 VWC2Q2TAL6 325 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 MIC13Q5XKP0 118 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 LYPD5Q6UWN5 251 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 C9orf47Q6ZRZ4 202 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 NRARPQ7Z6K4 114 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 CHAC2Q8WUX2 184 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 AGPAT4-IT1Q9H0P7 198 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 TMEM14CQ9P0S9 112 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 WDR83OSQ9Y284 106 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 TNFRSF18Q9Y5U5 241 aa7.08□□□□□ -1.28
HDLBP-227ENST00000458564 HIST1H1EP10412 219 aaKnown RBP7.07□□□□□ -1.28
HDLBP-227ENST00000458564 BTCP35070 178 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 RPL29P47914 159 aaKnown RBP7.07□□□□□ -1.28
HDLBP-227ENST00000458564 ERCC8Q13216 396 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 SPANXN2Q5MJ10 180 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 NEGR1Q7Z3B1 354 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 C12orf45Q8N5I9 185 aaPredicted RBP7.07□□□□□ -1.28
HDLBP-227ENST00000458564 ZFAND2AQ8N6M9 145 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 C11orf1Q9H5F2 150 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 SLC39A9Q9NUM3 307 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 UQCC1Q9NVA1 299 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 GSKIPQ9P0R6 139 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 HHLA3Q9XRX5 114 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 LY96Q9Y6Y9 160 aa7.07□□□□□ -1.28
HDLBP-227ENST00000458564 TRBV7-9A0A0J9YWB2 115 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 L7N2F9 121 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 GPX1P07203 203 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 RNASE4P34096 147 aaKnown RBP7.06□□□□□ -1.28
HDLBP-227ENST00000458564 VAMP2P63027 116 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 FHL2Q14192 279 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 BAK1Q16611 211 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 PRR9Q5T870 116 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 TRIQKQ629K1 86 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 MSRB1Q9NZV6 116 aa7.06□□□□□ -1.28
HDLBP-227ENST00000458564 IGHV1OR15-1A0A075B7D0 117 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 RGS13O14921 159 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 CST7O76096 145 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 IGHV3-53P01767 116 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 GCSHP23434 173 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 INPP1P49441 399 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 CNPY1Q3B7I2 92 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 IQCF2Q8IXL9 164 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 C8orf49Q96NF6 230 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 ARPC5LQ9BPX5 153 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 MRPL32Q9BYC8 188 aaKnown RBP7.05□□□□□ -1.28
HDLBP-227ENST00000458564 C20orf85Q9H1P6 137 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 MRPL16Q9NX20 251 aaKnown RBP7.05□□□□□ -1.28
HDLBP-227ENST00000458564 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
HDLBP-227ENST00000458564 IGKV2-40A0A087WW87 121 aaPredicted RBP7.04□□□□□ -1.28
HDLBP-227ENST00000458564 CENPXA8MT69 81 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 K7EQD1 137 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 PRAF2O60831 178 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 IGKV2D-40P01614 121 aaPredicted RBP7.04□□□□□ -1.28
HDLBP-227ENST00000458564 PYYP10082 97 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 EVI2AP22794 236 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 SRIP30626 198 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 CAV2P51636 162 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 ZNF415Q09FC8 603 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 ZNF846Q147U1 533 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 TMEM78Q5T7P6 136 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 WFDC10BQ8IUB3 73 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 EXOC3-AS1Q8N2X6 119 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 C10orf126Q8N4M7 172 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 TMEM70Q9BUB7 260 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 AAMDCQ9H7C9 122 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 LYRM2Q9NU23 88 aaPredicted RBP7.04□□□□□ -1.28
HDLBP-227ENST00000458564 ZNF492Q9P255 531 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 TIMM9Q9Y5J7 89 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 DNAH8Q96JB1 4490 aa7.04□□□□□ -1.28
HDLBP-227ENST00000458564 UBE2L5PA0A1B0GUS4 154 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 CCSO14618 274 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 ORM1P02763 201 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
HDLBP-227ENST00000458564 S100A11P31949 105 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 SULT1A1P50225 295 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 BCAP31P51572 246 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 BAXQ07812 192 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 Q6ZQT7 251 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 Q6ZSN1 163 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 OR10G4Q8NGN3 311 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 NTN5Q8WTR8 489 aaPredicted RBP7.03□□□□□ -1.28
HDLBP-227ENST00000458564 RASL10AQ92737 203 aa7.03□□□□□ -1.28
HDLBP-227ENST00000458564 SDHCQ99643 169 aaPredicted RBP7.03□□□□□ -1.28
HDLBP-227ENST00000458564 LSM5Q9Y4Y9 91 aaKnown RBP7.03□□□□□ -1.28
HDLBP-227ENST00000458564 TRGV4A0A0C4DH28 118 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms