RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 DNAH9Q9NYC9 4486 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 FXYD7P58549 80 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 TMEM78Q5T7P6 136 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 HIST1H2BAQ96A08 127 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 FAM19A4Q96LR4 140 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 LINC00477Q96M19 166 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 ODF3Q96PU9 254 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 RARRES2Q99969 163 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 TXNDC17Q9BRA2 123 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 ZNF492Q9P255 531 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
TRIM39-211ENST00000458516 TRAV8-1A0A0A6YYK1 113 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 RBFOX3A6NFN3 312 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 CA1P00915 261 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-211ENST00000458516 IGLV2-11P01706 119 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 TAGLN2P37802 199 aaKnown RBP12.32□□□□□ -0.44
TRIM39-211ENST00000458516 MEF2BQ02080 365 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-211ENST00000458516 ZNF506Q5JVG8 444 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 CLLU1Q5K131 121 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 TMEM75Q8N9X5 138 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 Q8TAT8 98 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 FAM210AQ96ND0 272 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 MEGF8Q7Z7M0 2845 aa12.32□□□□□ -0.44
TRIM39-211ENST00000458516 F6UZH7 168 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 K7EQM0 130 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 M0R2Z0 102 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 RGS13O14921 159 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 ZNF138P52744 262 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 RAB14P61106 215 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
TRIM39-211ENST00000458516 SPINK13Q1W4C9 94 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 TOR2AQ5JU69 321 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 C2CD4CQ8TF44 421 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 C11orf52Q96A22 123 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 LINC00479Q96M42 142 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 ASCL2Q99929 193 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 B9D2Q9BPU9 175 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 PPP1R14DQ9NXH3 145 aa12.31□□□□□ -0.44
TRIM39-211ENST00000458516 TRAV34A0A0B4J273 112 aa12.3□□□□□ -0.44
TRIM39-211ENST00000458516 UBE2CO00762 179 aa12.3□□□□□ -0.44
TRIM39-211ENST00000458516 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-211ENST00000458516 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
TRIM39-211ENST00000458516 PSG8Q9UQ74 426 aa12.3□□□□□ -0.44
TRIM39-211ENST00000458516 CRISP2P16562 243 aa12.29□□□□□ -0.44
TRIM39-211ENST00000458516 LEPP41159 167 aa12.29□□□□□ -0.44
TRIM39-211ENST00000458516 AKR1C3P42330 323 aa12.29□□□□□ -0.44
TRIM39-211ENST00000458516 CDKN1BP46527 198 aa12.29□□□□□ -0.44
TRIM39-211ENST00000458516 FLI1Q01543 452 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-211ENST00000458516 KIR3DS1Q14943 382 aa12.29□□□□□ -0.44
TRIM39-211ENST00000458516 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
TRIM39-211ENST00000458516 KLF12Q9Y4X4 402 aa12.29□□□□□ -0.44
TRIM39-211ENST00000458516 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
TRIM39-211ENST00000458516 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 TRBV7-9A0A0J9YWB2 115 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 FBLL1A6NHQ2 334 aaKnown RBP12.28□□□□□ -0.44
TRIM39-211ENST00000458516 PDE6DO43924 150 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 AMBPP02760 352 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 TSPOP30536 169 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 DEFB135Q30KP9 77 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 Q86TA4 180 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 ZFAND2AQ8N6M9 145 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 CSNK1G2-AS1Q8NCQ2 148 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 EIF5A2Q9GZV4 153 aaKnown RBP12.28□□□□□ -0.44
TRIM39-211ENST00000458516 LENEPQ9Y5L5 61 aa12.28□□□□□ -0.44
TRIM39-211ENST00000458516 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 KLLNB2CW77 178 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 J3KRW8 73 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 TMEM183BQ1AE95 376 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 PRR9Q5T870 116 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 Q6ZWC4 215 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 PRNTQ86SH4 94 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 FMC1Q96HJ9 113 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 TM2D3Q9BRN9 247 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 RETNQ9HD89 108 aa12.27□□□□□ -0.45
TRIM39-211ENST00000458516 UBE2G1P62253 170 aa12.26□□□□□ -0.45
TRIM39-211ENST00000458516 GFI1BQ5VTD9 330 aa12.26□□□□□ -0.45
TRIM39-211ENST00000458516 IGF2BP2-AS1Q96M15 143 aa12.26□□□□□ -0.45
TRIM39-211ENST00000458516 DERL1Q9BUN8 251 aa12.26□□□□□ -0.45
TRIM39-211ENST00000458516 NDUFS6O75380 124 aaKnown RBP12.25□□□□□ -0.45
TRIM39-211ENST00000458516 INSP01308 110 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 RBMY1A1P0DJD3 496 aaKnown RBP12.25□□□□□ -0.45
TRIM39-211ENST00000458516 RBMY1CP0DJD4 496 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 SRSF3P84103 164 aaKnown RBP12.25□□□□□ -0.45
TRIM39-211ENST00000458516 BTN1A1Q13410 526 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 RBMY1FQ15415 496 aaKnown RBP12.25□□□□□ -0.45
TRIM39-211ENST00000458516 RNF183Q96D59 192 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 C8orf49Q96NF6 230 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 NDFIP1Q9BT67 221 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 TREM1Q9NP99 234 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 MED9Q9NWA0 146 aa12.25□□□□□ -0.45
TRIM39-211ENST00000458516 C7orf71A4D174 169 aa12.24□□□□□ -0.45
TRIM39-211ENST00000458516 TMEM250H0YL14 139 aa12.24□□□□□ -0.45
TRIM39-211ENST00000458516 LTAP01374 205 aa12.24□□□□□ -0.45
TRIM39-211ENST00000458516 S100A9P06702 114 aaKnown RBP12.24□□□□□ -0.45
TRIM39-211ENST00000458516 RPL35P42766 123 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms