RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 DLX6P56179 175 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-207ENST00000458046 FAM231DQ6ZW35 169 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 LINC00311Q8N616 119 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 OR4B1Q8NGF8 309 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 LYNX1G3V0Z9 82 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 LYNX1P0DP58 116 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 MYCNOSP40205 109 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 MMDQ15546 238 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 TMEM155Q4W5P6 130 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 C11orf42Q8N5U0 333 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 ABCA2Q9BZC7 2435 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 CTRLP40313 264 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 RASL11BQ9BPW5 248 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 CLEC7AQ9BXN2 247 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 CST9LQ9H4G1 147 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 Q9UF83 564 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 APC2O95996 2303 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-207ENST00000458046 HYPMO75409 117 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 RPL27AP46776 148 aaKnown RBP9.27□□□□□ -0.93
SYNE2-207ENST00000458046 CD300EQ496F6 205 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-207ENST00000458046 GFRALQ6UXV0 394 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 TMEM133Q9H2Q1 129 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 C7orf69Q9H7B7 122 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 ZNF835Q9Y2P0 537 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 E7EQL1 145 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 FAM19A5Q7Z5A7 132 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-207ENST00000458046 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.93
SYNE2-207ENST00000458046 UBR5O95071 2799 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-207ENST00000458046 M0R2Z0 102 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 HOXD3P31249 432 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-207ENST00000458046 RNF183Q96D59 192 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 GPR82Q96P67 336 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 INSIG2Q9Y5U4 225 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 ZNF137PP52743 207 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-207ENST00000458046 Q6ZN92 141 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 OR4F17Q8NGA8 305 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 PGLYRP4Q96LB8 373 aa9.26□□□□□ -0.93
SYNE2-207ENST00000458046 MRPL27Q9P0M9 148 aaKnown RBP9.26□□□□□ -0.93
SYNE2-207ENST00000458046 CREBBPQ92793 2442 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 TRAV8-1A0A0A6YYK1 113 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 IGHV1-69-2A0A0G2JMI3 117 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 IGLC2P0DOY2 106 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 IGLC3P0DOY3 106 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 COX7A1P24310 79 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 PMCHL1Q16048 86 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 Q56UQ5 140 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 EBLN2Q6P2I7 272 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 RASL11AQ6T310 242 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 TRGV9Q99603 122 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 Q9H3A6 140 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 KLF12Q9Y4X4 402 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 MALRD1Q5VYJ5 2156 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 DCHS2Q6V1P9 2916 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 IGHV2-26A0A0B4J1V2 119 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 SHISA9B4DS77 424 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 LYZP61626 148 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 CD164Q04900 197 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 PRR30Q53SZ7 412 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-207ENST00000458046 TEX45Q8NA69 505 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 GTSF1Q8WW33 167 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 MLST8Q9BVC4 326 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 MEGF9Q9H1U4 602 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 FBXL15Q9H469 300 aa9.25□□□□□ -0.93
SYNE2-207ENST00000458046 SVEP1Q4LDE5 3571 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 P01737 135 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 AZU1P20160 251 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 C1orf195Q5TG92 126 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 RPP21Q9H633 154 aaKnown RBP9.24□□□□□ -0.93
SYNE2-207ENST00000458046 KAAG1Q9UBP8 84 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 UQCR10Q9UDW1 63 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 TCRAP04437 139 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 PSG1P11464 419 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 TCTAP57738 103 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 SSX8Q7RTT4 187 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 PPP1R27Q86WC6 154 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 C8orf46Q8TAG6 207 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 IGFBPL1Q8WX77 278 aa9.24□□□□□ -0.93
SYNE2-207ENST00000458046 IGHV1-3A0A0C4DH29 117 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 NUDT3O95989 172 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 RBP4P02753 201 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 FAM162BQ5T6X4 162 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 CIARTQ8N365 385 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-207ENST00000458046 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 OR13C6PQ8NH95 151 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 B5MCH6 92 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 TOMM40O96008 361 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 HNRNPA3P51991 378 aaKnown RBP9.23□□□□□ -0.93
SYNE2-207ENST00000458046 HBBP68871 147 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 LDLRAD2Q5SZI1 272 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 URB1-AS1Q96HZ7 61 aa9.23□□□□□ -0.93
SYNE2-207ENST00000458046 HIGD1AQ9Y241 93 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms