RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 OR5C1Q8NGR4 320 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 THAP6Q8TBB0 222 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 ODF3Q96PU9 254 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 M0R3E3 92 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 MPDU1O75352 247 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 PYYP10082 97 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 NPCDR1Q9BY65 106 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 SMIM3Q9BZL3 60 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 SLC25A31Q9H0C2 315 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.65
CHCHD3-204ENST00000457942 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 A0A0J9YY99 117 aa11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 NBDYA0A0U1RRE5 68 aa11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 ERCC8Q13216 396 aa11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 GCSAMLQ5JQS6 135 aa11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 PYGO2Q9BRQ0 406 aa11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
CHCHD3-204ENST00000457942 C7orf71A4D174 169 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 SLC25A5P05141 298 aaKnown RBP11□□□□□ -0.65
CHCHD3-204ENST00000457942 M6PRP20645 277 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 TNP2Q05952 138 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 PDE6HQ13956 83 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 SSX7Q7RTT5 188 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 CHAC2Q8WUX2 184 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 KCNIP2Q9NS61 270 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 LINC00588Q9Y4M8 146 aa11□□□□□ -0.65
CHCHD3-204ENST00000457942 CDK2AP2O75956 126 aa10.99□□□□□ -0.65
CHCHD3-204ENST00000457942 PET100P0DJ07 73 aa10.99□□□□□ -0.65
CHCHD3-204ENST00000457942 ZNF680Q8NEM1 530 aa10.99□□□□□ -0.65
CHCHD3-204ENST00000457942 SLC25A2Q9BXI2 301 aa10.99□□□□□ -0.65
CHCHD3-204ENST00000457942 HSPB11Q9Y547 144 aa10.99□□□□□ -0.65
CHCHD3-204ENST00000457942 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 NDUFB4O95168 129 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 RPL12P30050 165 aaKnown RBP10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 BTN1A1Q13410 526 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 ICAM4Q14773 271 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 FAM122CQ6P4D5 195 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 MIR17HGQ75NE6 70 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 C6orf223Q8N319 242 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 LINC00612Q8N6U2 182 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 TMPRSS5Q9H3S3 457 aa10.98□□□□□ -0.65
CHCHD3-204ENST00000457942 IGKV2-40A0A087WW87 121 aaPredicted RBP10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 C17orf112F2Z3M2 114 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 IGKV2D-40P01614 121 aaPredicted RBP10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 GPX1P07203 203 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 HOXA5P20719 270 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 Q5BKY6 102 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 Q6ZTI0 123 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 EIF4E3Q8N5X7 224 aaKnown RBP10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 RXFP4Q8TDU9 374 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 AGPAT4-IT1Q9H0P7 198 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 SCRT2Q9NQ03 307 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 GSN-AS1Q9NRJ2 163 aa10.97□□□□□ -0.65
CHCHD3-204ENST00000457942 TRGV1A0A0A0MS02 117 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 RGS13O14921 159 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 OR10J4P0C629 311 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 CD300CQ08708 224 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 DAZ2Q13117 558 aaKnown RBP10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 Q8N1X5 172 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 ATP5SQ99766 215 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 PAXXQ9BUH6 204 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 WDR61Q9GZS3 305 aaKnown RBP10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 OR51M1Q9H341 326 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 WFDC1Q9HC57 220 aa10.96□□□□□ -0.65
CHCHD3-204ENST00000457942 KLLNB2CW77 178 aa10.95□□□□□ -0.66
CHCHD3-204ENST00000457942 OR7C2O60412 319 aa10.95□□□□□ -0.66
CHCHD3-204ENST00000457942 NBEAP1P0C6P0 100 aa10.95□□□□□ -0.66
CHCHD3-204ENST00000457942 ZNF503Q96F45 646 aa10.95□□□□□ -0.66
CHCHD3-204ENST00000457942 ARPC5LQ9BPX5 153 aa10.95□□□□□ -0.66
CHCHD3-204ENST00000457942 Q9H8V8 135 aa10.95□□□□□ -0.66
CHCHD3-204ENST00000457942 GIPP09681 153 aaPredicted RBP10.94□□□□□ -0.66
CHCHD3-204ENST00000457942 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
CHCHD3-204ENST00000457942 C9orf47Q6ZRZ4 202 aa10.94□□□□□ -0.66
CHCHD3-204ENST00000457942 FAM167A-AS1Q96KT0 104 aa10.94□□□□□ -0.66
CHCHD3-204ENST00000457942 VGLL1Q99990 258 aa10.94□□□□□ -0.66
CHCHD3-204ENST00000457942 FUT9Q9Y231 359 aa10.94□□□□□ -0.66
CHCHD3-204ENST00000457942 DNAH5Q8TE73 4624 aa10.94□□□□□ -0.66
CHCHD3-204ENST00000457942 FXYD6-FXYD2A0A087WZ82 144 aa10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 CSN1S1P47710 185 aa10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 UBE2L3P68036 154 aaKnown RBP10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 ANXA2RQ3ZCQ2 193 aa10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 C11orf72Q8NBR9 251 aa10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 Q8TAT8 98 aa10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 PHYHIPLQ96FC7 376 aa10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 FAM19A4Q96LR4 140 aa10.93□□□□□ -0.66
CHCHD3-204ENST00000457942 H3BNG1 76 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms