RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SYS1-DBNDD2H3BUS1 97 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 M0R378 163 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 COX7A2LO14548 114 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 UTP20O75691 2785 aaKnown RBP4.08□□□□□ -1.76
VPS41-209ENST00000457055 SCGB1C2P0DMR2 95 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 COX6A1P12074 109 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 F5P12259 2224 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 FAUP35544 74 aaKnown RBP4.08□□□□□ -1.76
VPS41-209ENST00000457055 CRYBA2P53672 197 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 SNRPD3P62318 126 aaKnown RBP4.08□□□□□ -1.76
VPS41-209ENST00000457055 HBBP68871 147 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 MYLKQ15746 1914 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 ETDBQ3ZM63 59 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 LINC00337Q8N6G1 96 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 APCDD1LQ8NCL9 501 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 OR10G2Q8NGC3 310 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 OR8A1Q8NGG7 326 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 OR5C1Q8NGR4 320 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 GEMIN6Q8WXD5 167 aaKnown RBP4.08□□□□□ -1.76
VPS41-209ENST00000457055 LSM10Q969L4 123 aaKnown RBP4.08□□□□□ -1.76
VPS41-209ENST00000457055 C17orf77Q96MU5 243 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 AMELYQ99218 206 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 TIMM17AQ99595 171 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 PLEKHF2Q9H8W4 249 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 DNAJC15Q9Y5T4 150 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 F11RQ9Y624 299 aaKnown RBP4.08□□□□□ -1.76
VPS41-209ENST00000457055 NBPF19A0A087WUL8 3843 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 RELNP78509 3460 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 CEP192Q8TEP8 1941 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 IGLV9-49A0A0B4J1Y8 123 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 TRBV7-7A0A0K0K1E9 115 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 COX7A2P2O60397 106 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 ZNF253O75346 499 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 IGHV3-9P01782 118 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 HLA-DQA1P01909 254 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 IL5P05113 134 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 RPS21P63220 83 aaKnown RBP4.07□□□□□ -1.76
VPS41-209ENST00000457055 ORMDL2Q53FV1 153 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 CLLU1OSQ5K130 101 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 C18orf65Q6ZTR6 163 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 LINC00596Q86U02 117 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 ZNF329Q86UD4 541 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 PCP2Q8IVA1 136 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 ODF3L1Q8IXM7 274 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 C6orf223Q8N319 242 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 C3orf56Q8N813 242 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 CHCHD10Q8WYQ3 142 aaPredicted RBP4.07□□□□□ -1.76
VPS41-209ENST00000457055 HDHD3Q9BSH5 251 aaPredicted RBP4.07□□□□□ -1.76
VPS41-209ENST00000457055 SLC25A22Q9H936 323 aa4.07□□□□□ -1.76
VPS41-209ENST00000457055 DYSFO75923 2080 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 SCN2AQ99250 2005 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 IGHV6-1A0A0B4J1U7 121 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 A0A0D9SFI3 127 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 CREBL2O60519 120 aaPredicted RBP4.06□□□□□ -1.76
VPS41-209ENST00000457055 ZNF737O75373 536 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 CSN1S1P47710 185 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 WFDC2Q14508 124 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 MLF2Q15773 248 aaPredicted RBP4.06□□□□□ -1.76
VPS41-209ENST00000457055 LGALS9CQ6DKI2 356 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 AMN1Q8IY45 258 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 ZNF101Q8IZC7 436 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 ZNRF1Q8ND25 227 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 DEFB124Q8NES8 71 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 FAM57AQ8TBR7 257 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 H1FXQ92522 213 aaKnown RBP4.06□□□□□ -1.76
VPS41-209ENST00000457055 TAF15Q92804 592 aaKnown RBP eCLIP4.06□□□□□ -1.76
VPS41-209ENST00000457055 TVP23CQ96ET8 276 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 RNF126Q9BV68 326 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 GABARAPL3Q9BY60 117 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 LSM2Q9Y333 95 aaKnown RBP4.06□□□□□ -1.76
VPS41-209ENST00000457055 MOB4Q9Y3A3 225 aa4.06□□□□□ -1.76
VPS41-209ENST00000457055 MGAQ8IWI9 3026 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 COL5A1P20908 1838 aaPredicted RBP4.05□□□□□ -1.76
VPS41-209ENST00000457055 TSC2P49815 1807 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 IGHV3OR16-13A0A075B7E8 117 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 ATOX1O00244 68 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 SDCBPO00560 298 aaPredicted RBP4.05□□□□□ -1.76
VPS41-209ENST00000457055 FSTL3O95633 263 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 PPP1R3DO95685 299 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 IGKCP01834 107 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 ZNF80P51504 273 aaPredicted RBP4.05□□□□□ -1.76
VPS41-209ENST00000457055 LINC00313P59037 77 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 ERVK-16P61578 105 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 GNB2P62879 340 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 UBE2BP63146 152 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 NMSQ5H8A3 153 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 Q6ZSV7 163 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 Q6ZTC4 211 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 PRNTQ86SH4 94 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 NEXN-AS1Q8NBZ9 246 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 MORN4Q8NDC4 146 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 STAG3L4Q8TBR4 150 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 C10orf105Q8TEF2 133 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 LINC00479Q96M42 142 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 MGST2Q99735 147 aa4.05□□□□□ -1.76
VPS41-209ENST00000457055 RHNO1Q9BSD3 238 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms