RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PTTG1O95997 202 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 CRISP2P16562 243 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 TAS2R45P59539 299 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 FFAR4Q5NUL3 377 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 LYPD1Q8N2G4 141 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 EXOC3-AS1Q8N2X6 119 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 ZNF680Q8NEM1 530 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 FAM19A4Q96LR4 140 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 DNAH10Q8IVF4 4471 aa12.58□□□□□ -0.4
MSH6-207ENST00000456246 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
MSH6-207ENST00000456246 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
MSH6-207ENST00000456246 FXYD5Q96DB9 178 aa12.57□□□□□ -0.4
MSH6-207ENST00000456246 LINC00467Q9BRT7 94 aa12.57□□□□□ -0.4
MSH6-207ENST00000456246 ATG101Q9BSB4 218 aa12.57□□□□□ -0.4
MSH6-207ENST00000456246 AGPAT4-IT1Q9H0P7 198 aa12.57□□□□□ -0.4
MSH6-207ENST00000456246 OR10J4P0C629 311 aa12.56□□□□□ -0.4
MSH6-207ENST00000456246 CSN1S1P47710 185 aa12.56□□□□□ -0.4
MSH6-207ENST00000456246 UBE2L3P68036 154 aaKnown RBP12.56□□□□□ -0.4
MSH6-207ENST00000456246 DAZ2Q13117 558 aaKnown RBP12.56□□□□□ -0.4
MSH6-207ENST00000456246 ERCC8Q13216 396 aa12.56□□□□□ -0.4
MSH6-207ENST00000456246 FAM122CQ6P4D5 195 aa12.56□□□□□ -0.4
MSH6-207ENST00000456246 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
MSH6-207ENST00000456246 ALG5Q9Y673 324 aa12.55□□□□□ -0.4
MSH6-207ENST00000456246 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
MSH6-207ENST00000456246 RBAKDNA6NC62 111 aa12.54□□□□□ -0.4
MSH6-207ENST00000456246 ZNF324O75467 553 aaPredicted RBP12.54□□□□□ -0.4
MSH6-207ENST00000456246 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
MSH6-207ENST00000456246 GPX1P07203 203 aa12.54□□□□□ -0.4
MSH6-207ENST00000456246 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
MSH6-207ENST00000456246 SOHLH1Q5JUK2 328 aa12.54□□□□□ -0.4
MSH6-207ENST00000456246 PHYHIPLQ96FC7 376 aa12.54□□□□□ -0.4
MSH6-207ENST00000456246 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
MSH6-207ENST00000456246 M0R2N4 97 aa12.53□□□□□ -0.4
MSH6-207ENST00000456246 NUDT3O95989 172 aa12.53□□□□□ -0.4
MSH6-207ENST00000456246 ZNF138P52744 262 aa12.53□□□□□ -0.4
MSH6-207ENST00000456246 CCL18P55774 89 aa12.53□□□□□ -0.4
MSH6-207ENST00000456246 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
MSH6-207ENST00000456246 ZNF266Q14584 549 aa12.53□□□□□ -0.4
MSH6-207ENST00000456246 ACOT6Q3I5F7 207 aaPredicted RBP12.53□□□□□ -0.4
MSH6-207ENST00000456246 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
MSH6-207ENST00000456246 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
MSH6-207ENST00000456246 NACAE9PAV3 2078 aa12.52□□□□□ -0.4
MSH6-207ENST00000456246 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 M6PRP20645 277 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 RNASE4P34096 147 aaKnown RBP12.52□□□□□ -0.41
MSH6-207ENST00000456246 RANP62826 216 aaKnown RBP12.52□□□□□ -0.41
MSH6-207ENST00000456246 CD300CQ08708 224 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.41
MSH6-207ENST00000456246 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 Q6ZR54 194 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 ZFAND2AQ8N6M9 145 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 RXFP4Q8TDU9 374 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 ASB13Q8WXK3 278 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 C18orf15Q96N68 181 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 VGLL1Q99990 258 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 MED28Q9H204 178 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 Q9H3A6 140 aa12.52□□□□□ -0.41
MSH6-207ENST00000456246 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 H3BNG1 76 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 GAGE7O76087 117 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 GNPNAT1Q96EK6 184 aaPredicted RBP12.51□□□□□ -0.41
MSH6-207ENST00000456246 LENEPQ9Y5L5 61 aa12.51□□□□□ -0.41
MSH6-207ENST00000456246 RGS13O14921 159 aa12.5□□□□□ -0.41
MSH6-207ENST00000456246 TCL1AP56279 114 aa12.5□□□□□ -0.41
MSH6-207ENST00000456246 OR5I1Q13606 314 aa12.5□□□□□ -0.41
MSH6-207ENST00000456246 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
MSH6-207ENST00000456246 C11orf72Q8NBR9 251 aa12.5□□□□□ -0.41
MSH6-207ENST00000456246 WFDC1Q9HC57 220 aa12.5□□□□□ -0.41
MSH6-207ENST00000456246 HECTD4Q9Y4D8 3996 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 TRAV26-1A0A087WT03 109 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 RTL8CO15255 209 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 CMTM2Q8TAZ6 248 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 TMED6Q8WW62 240 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 AQP10Q96PS8 301 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 OTORQ9NRC9 128 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 GSN-AS1Q9NRJ2 163 aa12.49□□□□□ -0.41
MSH6-207ENST00000456246 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
MSH6-207ENST00000456246 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
MSH6-207ENST00000456246 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
MSH6-207ENST00000456246 DIRC3C9JPN6 131 aa12.48□□□□□ -0.41
MSH6-207ENST00000456246 Q6ZTI0 123 aa12.48□□□□□ -0.41
MSH6-207ENST00000456246 Q8TAT8 98 aa12.48□□□□□ -0.41
MSH6-207ENST00000456246 GIPP09681 153 aaPredicted RBP12.47□□□□□ -0.41
MSH6-207ENST00000456246 PRR9Q5T870 116 aa12.47□□□□□ -0.41
MSH6-207ENST00000456246 C1orf134Q5TEV5 83 aa12.47□□□□□ -0.41
MSH6-207ENST00000456246 OR10G4Q8NGN3 311 aa12.47□□□□□ -0.41
MSH6-207ENST00000456246 OR10G9Q8NGN4 311 aa12.47□□□□□ -0.41
MSH6-207ENST00000456246 OR10G7Q8NGN6 311 aa12.47□□□□□ -0.41
MSH6-207ENST00000456246 OR2G3Q8NGZ4 309 aa12.47□□□□□ -0.41
MSH6-207ENST00000456246 ZNRF2Q8NHG8 242 aa12.47□□□□□ -0.41
MSH6-207ENST00000456246 PSMG3Q9BT73 122 aaPredicted RBP12.47□□□□□ -0.41
MSH6-207ENST00000456246 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms