RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 SIGLEC15Q6ZMC9 328 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 DEFB124Q8NES8 71 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 PINLYPA6NC86 204 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 FAM57AQ8TBR7 257 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 DOCK7Q96N67 2140 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 PKDREJQ9NTG1 2253 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 TINCRA0A1B0GVN0 87 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 RBMY1FQ15415 496 aaKnown RBP9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 HAMPP81172 84 aa9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 CR1LQ2VPA4 569 aa9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 DUX4L9Q6RFH8 374 aaPredicted RBP9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 IGLV3-12A0A075B6K2 115 aa9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 DNAJC30Q96LL9 226 aa9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 C9orf172C9J069 976 aa9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 GATA1P15976 413 aaPredicted RBP9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 NDUFV3P56181 108 aaKnown RBP9.9□□□□□ -0.82
NEDD4L-208ENST00000456173 SPTAN1Q13813 2472 aaKnown RBP9.9□□□□□ -0.83
NEDD4L-208ENST00000456173 IGKV1D-17A0A075B6S4 117 aa9.9□□□□□ -0.83
NEDD4L-208ENST00000456173 RASL10AQ92737 203 aa9.9□□□□□ -0.83
NEDD4L-208ENST00000456173 SCN10AQ9Y5Y9 1956 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 Q6ZR03 302 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 PHLDA1Q8WV24 401 aaPredicted RBP9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 OVOL2Q9BRP0 275 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 OVOL1O14753 267 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 MRPL14Q6P1L8 145 aaKnown RBP9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 TMEM190Q8WZ59 177 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 PARP14Q460N5 1801 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 A0A1B0GX51 115 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 C17orf100A8MU93 164 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 CTRLP40313 264 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 TRIP6Q15654 476 aaKnown RBP9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 C15orf32Q32M92 178 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 ITLN2Q8WWU7 325 aaPredicted RBP9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 JPT2Q9H910 190 aa9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
NEDD4L-208ENST00000456173 RSPO1Q2MKA7 263 aaPredicted RBP9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 SAP25Q8TEE9 199 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 VWCEQ96DN2 955 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 C1orf159Q96HA4 380 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 SMIM2Q9BVW6 85 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 CFHR1Q03591 330 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 KLHL30-AS1Q8NEE0 82 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 NDUFA12Q9UI09 145 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 LINC00527Q9UJ94 153 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 GPR179Q6PRD1 2367 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 TMEM200BQ69YZ2 307 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 ZNF493Q6ZR52 646 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 PRR25Q96S07 402 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 CHCHD5Q9BSY4 110 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 FOXL2NBQ6ZUU3 175 aa9.88□□□□□ -0.83
NEDD4L-208ENST00000456173 PRB1P04280 392 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 C1orf162Q8NEQ5 155 aaPredicted RBP9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 ANK1P16157 1881 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 ZNF407Q9C0G0 2248 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 C9orf106Q8NAJ2 232 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 UBL5Q9BZL1 73 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 IGHV1-18A0A0C4DH31 117 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 SIGLEC9Q9Y336 463 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 TMEM243Q9BU79 118 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 NDUFA4L2Q9NRX3 87 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 RALGAPA2Q2PPJ7 1873 aa9.87□□□□□ -0.83
NEDD4L-208ENST00000456173 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.86□□□□□ -0.834e-7■■■■■ 28.2
NEDD4L-208ENST00000456173 LYNX1G3V0Z9 82 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 LYNX1P0DP58 116 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 PDE6HQ13956 83 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 PLXNA1Q9UIW2 1896 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 TRGV2A0A075B6R0 118 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 LINC01620Q4KN68 170 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 TMEM141Q96I45 108 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 GHRHP01286 108 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 PAX8Q06710 450 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 TP53TG3Q9ULZ0 132 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 IGHV1-3A0A0C4DH29 117 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 IGHV1-46P01743 117 aa9.86□□□□□ -0.83
NEDD4L-208ENST00000456173 RBBP6Q7Z6E9 1792 aaKnown RBP9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 BSPH1Q075Z2 132 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 BRCA1P38398 1863 aaKnown RBP9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 TMEM258P61165 79 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 GTSF1Q8WW33 167 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 A4D1N5 150 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 MALP21145 153 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 BAALC-AS2P0C853 105 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 WT1-ASQ06250 92 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 TRPT1Q86TN4 253 aaKnown RBP9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 C17orf77Q96MU5 243 aa9.85□□□□□ -0.83
NEDD4L-208ENST00000456173 TRAV41A0A0B4J266 112 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 IGF2BP2-AS1Q96M15 143 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 C5orf64Q2M2E5 130 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 LYPD6Q86Y78 171 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 C1orf210Q8IVY1 113 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 SMRP1Q8NCR6 262 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms