RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 PAXXQ9BUH6 204 aa12.47□□□□□ -0.41
COL13A1-206ENST00000456019 MBD2Q9UBB5 411 aa12.47□□□□□ -0.41
COL13A1-206ENST00000456019 GIPP09681 153 aaPredicted RBP12.46□□□□□ -0.41
COL13A1-206ENST00000456019 LGALS9BQ3B8N2 356 aa12.46□□□□□ -0.41
COL13A1-206ENST00000456019 Q5BKY6 102 aa12.46□□□□□ -0.41
COL13A1-206ENST00000456019 SCGB1C1Q8TD33 95 aa12.46□□□□□ -0.41
COL13A1-206ENST00000456019 ASB13Q8WXK3 278 aa12.46□□□□□ -0.41
COL13A1-206ENST00000456019 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.41
COL13A1-206ENST00000456019 C7orf71A4D174 169 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 SNURFLB1AK76 121 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 M0R2N4 97 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 FFAR4Q5NUL3 377 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 FAM122CQ6P4D5 195 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 C9orf47Q6ZRZ4 202 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 FXYD5Q96DB9 178 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 FAM19A4Q96LR4 140 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 SMIM3Q9BZL3 60 aa12.45□□□□□ -0.42
COL13A1-206ENST00000456019 KLLNB2CW77 178 aa12.44□□□□□ -0.42
COL13A1-206ENST00000456019 OR7C2O60412 319 aa12.44□□□□□ -0.42
COL13A1-206ENST00000456019 OR10J4P0C629 311 aa12.44□□□□□ -0.42
COL13A1-206ENST00000456019 FAM3BP58499 235 aaPredicted RBP12.44□□□□□ -0.42
COL13A1-206ENST00000456019 TMEM78Q5T7P6 136 aa12.44□□□□□ -0.42
COL13A1-206ENST00000456019 LINC00612Q8N6U2 182 aa12.44□□□□□ -0.42
COL13A1-206ENST00000456019 IGLV2-18A0A075B6J9 118 aa12.43□□□□□ -0.42
COL13A1-206ENST00000456019 IGKV2-40A0A087WW87 121 aaPredicted RBP12.43□□□□□ -0.42
COL13A1-206ENST00000456019 IGKV2D-40P01614 121 aaPredicted RBP12.43□□□□□ -0.42
COL13A1-206ENST00000456019 NMBP08949 121 aa12.43□□□□□ -0.42
COL13A1-206ENST00000456019 CRISP2P16562 243 aa12.43□□□□□ -0.42
COL13A1-206ENST00000456019 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
COL13A1-206ENST00000456019 ZNF324O75467 553 aaPredicted RBP12.42□□□□□ -0.42
COL13A1-206ENST00000456019 NUDT3O95989 172 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 GPX1P07203 203 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
COL13A1-206ENST00000456019 TAS2R45P59539 299 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 CD300CQ08708 224 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 BTN1A1Q13410 526 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 KHDC3LQ587J8 217 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 LYPD1Q8N2G4 141 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 ZNF680Q8NEM1 530 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 PHYHIPLQ96FC7 376 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 VGLL1Q99990 258 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 LINC00467Q9BRT7 94 aa12.42□□□□□ -0.42
COL13A1-206ENST00000456019 GAGE12BA1L429 117 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 G3V3Q6 166 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 GAGE7O76087 117 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 GAGE12FP0CL80 117 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 GAGE12GP0CL81 117 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 GAGE12IP0CL82 117 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 CSN1S1P47710 185 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 UBE2L3P68036 154 aaKnown RBP12.41□□□□□ -0.42
COL13A1-206ENST00000456019 DAZ2Q13117 558 aaKnown RBP12.41□□□□□ -0.42
COL13A1-206ENST00000456019 Q6ZNX1 250 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 Q6ZR54 194 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 ZNF503Q96F45 646 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 WFDC1Q9HC57 220 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 ZNF492Q9P255 531 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 HECTD4Q9Y4D8 3996 aa12.41□□□□□ -0.42
COL13A1-206ENST00000456019 RANP62826 216 aaKnown RBP12.4□□□□□ -0.42
COL13A1-206ENST00000456019 ANXA2RQ3ZCQ2 193 aa12.4□□□□□ -0.42
COL13A1-206ENST00000456019 EIF4E3Q8N5X7 224 aaKnown RBP12.4□□□□□ -0.42
COL13A1-206ENST00000456019 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 RTL8CO15255 209 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 ZNF138P52744 262 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 CCL18P55774 89 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 OR5I1Q13606 314 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 ACOT6Q3I5F7 207 aaPredicted RBP12.39□□□□□ -0.43
COL13A1-206ENST00000456019 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 OR2T35Q8NGX2 323 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 AQP10Q96PS8 301 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 Q9H3A6 140 aa12.39□□□□□ -0.43
COL13A1-206ENST00000456019 RBAKDNA6NC62 111 aa12.38□□□□□ -0.43
COL13A1-206ENST00000456019 PRSS29PA6NIE9 313 aa12.38□□□□□ -0.43
COL13A1-206ENST00000456019 M6PRP20645 277 aa12.38□□□□□ -0.43
COL13A1-206ENST00000456019 Q6ZTI0 123 aa12.38□□□□□ -0.43
COL13A1-206ENST00000456019 C11orf72Q8NBR9 251 aa12.38□□□□□ -0.43
COL13A1-206ENST00000456019 GSN-AS1Q9NRJ2 163 aa12.38□□□□□ -0.43
COL13A1-206ENST00000456019 TRAV26-1A0A087WT03 109 aa12.37□□□□□ -0.43
COL13A1-206ENST00000456019 A0A1W2PPV4 95 aa12.37□□□□□ -0.43
COL13A1-206ENST00000456019 RGS13O14921 159 aa12.37□□□□□ -0.43
COL13A1-206ENST00000456019 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
COL13A1-206ENST00000456019 PRR9Q5T870 116 aa12.37□□□□□ -0.43
COL13A1-206ENST00000456019 Q8TAT8 98 aa12.37□□□□□ -0.43
COL13A1-206ENST00000456019 RXFP4Q8TDU9 374 aa12.37□□□□□ -0.43
COL13A1-206ENST00000456019 GNPNAT1Q96EK6 184 aaPredicted RBP12.37□□□□□ -0.43
COL13A1-206ENST00000456019 DNAH2Q9P225 4427 aa12.36□□□□□ -0.43
COL13A1-206ENST00000456019 HOXA5P20719 270 aa12.36□□□□□ -0.43
COL13A1-206ENST00000456019 TCL1AP56279 114 aa12.36□□□□□ -0.43
COL13A1-206ENST00000456019 IBA57Q5T440 356 aaKnown RBP12.36□□□□□ -0.43
COL13A1-206ENST00000456019 PQLC2Q6ZP29 291 aa12.36□□□□□ -0.43
COL13A1-206ENST00000456019 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
COL13A1-206ENST00000456019 TNFSF18Q9UNG2 199 aa12.36□□□□□ -0.43
COL13A1-206ENST00000456019 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
COL13A1-206ENST00000456019 TRGV2A0A075B6R0 118 aa12.35□□□□□ -0.43
COL13A1-206ENST00000456019 IGHV1OR15-1A0A075B7D0 117 aa12.35□□□□□ -0.43
COL13A1-206ENST00000456019 TRGV1A0A0A0MS02 117 aa12.35□□□□□ -0.43
COL13A1-206ENST00000456019 A0A1B0GVY2 172 aa12.35□□□□□ -0.43
COL13A1-206ENST00000456019 RNF222A6NCQ9 220 aa12.35□□□□□ -0.43
COL13A1-206ENST00000456019 DIRC3C9JPN6 131 aa12.35□□□□□ -0.43
COL13A1-206ENST00000456019 ZNF266Q14584 549 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms