RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 TMED6Q8WW62 240 aa10.6□□□□□ -0.71
CLCN1-203ENST00000455478 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
CLCN1-203ENST00000455478 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
CLCN1-203ENST00000455478 RBAKDNA6NC62 111 aa10.59□□□□□ -0.71
CLCN1-203ENST00000455478 SMIM9A6NGZ8 99 aa10.59□□□□□ -0.71
CLCN1-203ENST00000455478 C3orf84H3BNL1 204 aa10.59□□□□□ -0.71
CLCN1-203ENST00000455478 TSPOP30536 169 aa10.59□□□□□ -0.71
CLCN1-203ENST00000455478 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
CLCN1-203ENST00000455478 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 MAP1LC3B2A6NCE7 125 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 PRM2P04554 102 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 SLC25A5P05141 298 aaKnown RBP10.58□□□□□ -0.72
CLCN1-203ENST00000455478 LEPP41159 167 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 FAM74A1Q5RGS3 127 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 TMEM78Q5T7P6 136 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 SLC51BQ86UW2 128 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 CMTM2Q8TAZ6 248 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 FAM213BQ8TBF2 198 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 MAP1LC3BQ9GZQ8 125 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 ZNF492Q9P255 531 aa10.58□□□□□ -0.72
CLCN1-203ENST00000455478 A0A1W2PRE2 83 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 GGTLC3B5MD39 225 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 J3KRW8 73 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 CRISP2P16562 243 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 ZNF138P52744 262 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 SUMO1P63165 101 aaKnown RBP10.57□□□□□ -0.72
CLCN1-203ENST00000455478 GNG5P63218 68 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 GFI1BQ5VTD9 330 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 ZFAND6Q6FIF0 208 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 DPPA3Q6W0C5 159 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 TMEM208Q9BTX3 173 aa10.57□□□□□ -0.72
CLCN1-203ENST00000455478 YTHDF2Q9Y5A9 579 aaKnown RBP10.57□□□□□ -0.72
CLCN1-203ENST00000455478 ZNF705GA8MUZ8 300 aaPredicted RBP10.56□□□□□ -0.72
CLCN1-203ENST00000455478 KLLNB2CW77 178 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 HBE1P02100 147 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 CASC10Q5T4H9 136 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 GOLT1AQ6ZVE7 132 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 TMEM256Q8N2U0 113 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 ZFAND2AQ8N6M9 145 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 Q8TAT8 98 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 LINC01587Q99440 93 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 RPH3ALQ9UNE2 315 aa10.56□□□□□ -0.72
CLCN1-203ENST00000455478 TRAV12-3A0A0B4J271 114 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 NMBP08949 121 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 AZU1P20160 251 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 NKX2-5P52952 324 aaPredicted RBP10.55□□□□□ -0.72
CLCN1-203ENST00000455478 UBE2G2P60604 165 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 EIF5AL1Q6IS14 154 aaKnown RBP10.55□□□□□ -0.72
CLCN1-203ENST00000455478 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 C11orf45Q8TAV5 145 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 SFT2D1Q8WV19 159 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
CLCN1-203ENST00000455478 LOC102723971A0A1B0GUV8 181 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 C7orf71A4D174 169 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 FAM74A7A6NL05 159 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 ZNF324O75467 553 aaPredicted RBP10.54□□□□□ -0.72
CLCN1-203ENST00000455478 TCRAP04437 139 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 TAS2R60P59551 318 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 NANOS2P60321 138 aaKnown RBP10.54□□□□□ -0.72
CLCN1-203ENST00000455478 PRR9Q5T870 116 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 STARD9Q9P2P6 4700 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 CELA1Q9UNI1 258 aa10.54□□□□□ -0.72
CLCN1-203ENST00000455478 TRAV8-1A0A0A6YYK1 113 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 TMEM189A5PLL7 270 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 H7BYZ3 331 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 GPX1P07203 203 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 H2AFB1P0C5Y9 115 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 RNASE4P34096 147 aaKnown RBP10.53□□□□□ -0.72
CLCN1-203ENST00000455478 SULT1A2P50226 295 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 RAB5CP51148 216 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 EMP1P54849 157 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 BTN1A1Q13410 526 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 TVP23CQ96ET8 276 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 LENEPQ9Y5L5 61 aa10.53□□□□□ -0.72
CLCN1-203ENST00000455478 A0A1B0GV50 99 aa10.52□□□□□ -0.73
CLCN1-203ENST00000455478 SERTM2A0A1B0GWG4 89 aa10.52□□□□□ -0.73
CLCN1-203ENST00000455478 HTN1P15515 57 aa10.52□□□□□ -0.73
CLCN1-203ENST00000455478 PMS2P11Q13670 270 aa10.52□□□□□ -0.73
CLCN1-203ENST00000455478 Q6ZQT7 251 aa10.52□□□□□ -0.73
CLCN1-203ENST00000455478 CCDC28AQ8IWP9 274 aa10.52□□□□□ -0.73
CLCN1-203ENST00000455478 SGK494Q96LW2 274 aa10.52□□□□□ -0.73
CLCN1-203ENST00000455478 NKX6-2Q9C056 277 aaPredicted RBP10.52□□□□□ -0.73
CLCN1-203ENST00000455478 TRAV1-1A0A0B4J248 108 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 PLAC8L1A1L4L8 177 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 CXorf65A6NEN9 183 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 IGLV2-11P01706 119 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 CCL20P78556 96 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 C12orf74Q32Q52 190 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
CLCN1-203ENST00000455478 PAGE4O60829 102 aa10.5□□□□□ -0.73
CLCN1-203ENST00000455478 IFNA7P01567 189 aa10.5□□□□□ -0.73
CLCN1-203ENST00000455478 SPART-AS1P0CW21 52 aa10.5□□□□□ -0.73
CLCN1-203ENST00000455478 FAM222AQ5U5X8 452 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms