RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 CENPWQ5EE01 88 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 PRNTQ86SH4 94 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 SPATA3Q8NHX4 192 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 SGK494Q96LW2 274 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 VGLL1Q99990 258 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 FAM110AQ9BQ89 295 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 NDFIP1Q9BT67 221 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 SDF2L1Q9HCN8 221 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 BIN3Q9NQY0 253 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 LENEPQ9Y5L5 61 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 AGRNO00468 2067 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TRAV8-1A0A0A6YYK1 113 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 OR11H12B2RN74 326 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ZNF138P52744 262 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ERCC8Q13216 396 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 SVBPQ8N300 66 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 OCC1Q8TAD7 63 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 SAV1Q9H4B6 383 aaPredicted RBP9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 MAP6D1Q9H9H5 199 aa9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ZMAT5Q9UDW3 170 aaKnown RBP9.34□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TRBV20OR9-2A0A075B6H5 130 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 A0A0J9YX75 114 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 B4DEV8 164 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 LTAP01374 205 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 HIST1H1AQ02539 215 aaPredicted RBP9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 Q86TA4 180 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 PRR25Q96S07 402 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
HLA-DPA1-244ENST00000453337 VWFP04275 2813 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 F6UB75 175 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 M0R036 132 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 SNAPINO95295 136 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ZNF705DP0CH99 300 aaPredicted RBP9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ZNF705BP0CI00 300 aaPredicted RBP9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 RPL23P62829 140 aaKnown RBP9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ADIRFQ15847 76 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 LINC01551Q86U37 167 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 MLST8Q9BVC4 326 aa9.32□□□□□ -0.92
HLA-DPA1-244ENST00000453337 IGLV2-8P01709 118 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 CT45A10P0DMU9 189 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 PRB4P10163 310 aaPredicted RBP9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 MGST1P10620 155 aaKnown RBP9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 HLA-DRB4P13762 266 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 DEFB1P60022 68 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 KRTAP21-3Q3LHN1 58 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ODF3L2Q3SX64 289 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 GTSCR1Q86UQ5 136 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 CLRN3Q8NCR9 226 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 OR4B1Q8NGF8 309 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ODF3Q96PU9 254 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 HLA-DRB4X5D2U9 266 aa9.31□□□□□ -0.92
HLA-DPA1-244ENST00000453337 PGPEP1LA6NFU8 196 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 H3BMM0 161 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 GCGP01275 180 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 CD7P09564 240 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 TSPOP30536 169 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 SMUG1Q53HV7 270 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ACTL10Q5JWF8 245 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 GDF5OSQ5U4N7 250 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 COX8CQ7Z4L0 72 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 APRG1Q8IVJ8 170 aa9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 AURKAIP1Q9NWT8 199 aaPredicted RBP9.3□□□□□ -0.92
HLA-DPA1-244ENST00000453337 KNCNA6PVL3 124 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 A8MTW9 85 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 MT-ND4LP03901 98 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 LEPP41159 167 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 RHEBQ15382 184 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 STHQ8IWL8 128 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 NHLRC2Q8NBF2 726 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 Q8TAT8 98 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ISOC2Q96AB3 205 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 DAZAP1Q96EP5 407 aaKnown RBP9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ASCL2Q99929 193 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 C19orf73Q9NVV2 129 aa9.29□□□□□ -0.92
HLA-DPA1-244ENST00000453337 FABP5P3A8MUU1 101 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 K7EN84 100 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 PPP1R2P9O14990 202 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 GPX1P07203 203 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 CRISP2P16562 243 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 C15orf54Q8N8G6 183 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 ANAPC16Q96DE5 110 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
HLA-DPA1-244ENST00000453337 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 IGKV3-20P01619 116 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 ERVFC1-1P60608 527 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 NUTF2P61970 127 aaKnown RBP9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 OR5I1Q13606 314 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 ZNF124Q15973 351 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 PRR27Q6MZM9 219 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 FAM231DQ6ZW35 169 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 OR10G8Q8NGN5 311 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms