RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 NMBP08949 121 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 TVP23CQ96ET8 276 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 FAM19A4Q96LR4 140 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 LINC00479Q96M42 142 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 GNG13Q9P2W3 67 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 EPDR1Q9UM22 224 aa11.4□□□□□ -0.58
VCX3B-204ENST00000453306 TRAV8-1A0A0A6YYK1 113 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 KIR2DL5BA0A0G2JN68 375 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 KIR2DL5BA0A0G2JPC4 375 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 DUSP14O95147 198 aaKnown RBP11.39□□□□□ -0.59
VCX3B-204ENST00000453306 IGLV2-11P01706 119 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 TCRAP04437 139 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 BLOC1S1P78537 153 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 PMS2P11Q13670 270 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 GOLT1AQ6ZVE7 132 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 KIR2DL5AQ8N109 375 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 C5orf17Q8NAS9 161 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 KIR2DL5BQ8NHK3 375 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 SGK494Q96LW2 274 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 RPH3ALQ9UNE2 315 aa11.39□□□□□ -0.59
VCX3B-204ENST00000453306 TEX46H3BTG2 121 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 M0R2Z0 102 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 HBE1P02100 147 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
VCX3B-204ENST00000453306 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
VCX3B-204ENST00000453306 SPINK13Q1W4C9 94 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 CST9LP1Q5W188 147 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 OR10J6PQ8NGY7 276 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 Q8TAT8 98 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 RARRES2Q99969 163 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 XCL2Q9UBD3 114 aa11.38□□□□□ -0.59
VCX3B-204ENST00000453306 TRAV34A0A0B4J273 112 aa11.37□□□□□ -0.59
VCX3B-204ENST00000453306 IFNA7P01567 189 aa11.37□□□□□ -0.59
VCX3B-204ENST00000453306 CSN1S1P47710 185 aa11.37□□□□□ -0.59
VCX3B-204ENST00000453306 Q6ZQT7 251 aa11.37□□□□□ -0.59
VCX3B-204ENST00000453306 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
VCX3B-204ENST00000453306 ARL2-SNX15V9GYD0 113 aa11.37□□□□□ -0.59
VCX3B-204ENST00000453306 TRAV12-2A0A075B6T6 113 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 RBAKDNA6NC62 111 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 CA1P00915 261 aaPredicted RBP11.36□□□□□ -0.59
VCX3B-204ENST00000453306 PRR9Q5T870 116 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 MORN3Q6PF18 240 aaPredicted RBP11.36□□□□□ -0.59
VCX3B-204ENST00000453306 C1orf158Q8N1D5 194 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 CMTM2Q8TAZ6 248 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 LINC00477Q96M19 166 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
VCX3B-204ENST00000453306 DNAH1Q9P2D7 4330 aa11.35□□□□□ -0.59
VCX3B-204ENST00000453306 LOC102723971A0A1B0GUV8 181 aa11.35□□□□□ -0.59
VCX3B-204ENST00000453306 SCO2A0A1W2PP80 73 aa11.35□□□□□ -0.59
VCX3B-204ENST00000453306 PEX7O00628 323 aa11.35□□□□□ -0.59
VCX3B-204ENST00000453306 APOC4P55056 127 aa11.35□□□□□ -0.59
VCX3B-204ENST00000453306 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
VCX3B-204ENST00000453306 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 UBE2CO00762 179 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 PRM2P04554 102 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 BCL2P10415 239 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 ZNF138P52744 262 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 Q6ZWC4 215 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 C2CD4CQ8TF44 421 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 RNF183Q96D59 192 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 ODF3Q96PU9 254 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 ATG101Q9BSB4 218 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 NKX6-2Q9C056 277 aaPredicted RBP11.34□□□□□ -0.59
VCX3B-204ENST00000453306 MANBALQ9NQG1 85 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 PPP1R14DQ9NXH3 145 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 KLF12Q9Y4X4 402 aa11.34□□□□□ -0.59
VCX3B-204ENST00000453306 J3KRW8 73 aa11.33□□□□□ -0.6
VCX3B-204ENST00000453306 CRISP2P16562 243 aa11.33□□□□□ -0.6
VCX3B-204ENST00000453306 PPT1P50897 306 aa11.33□□□□□ -0.6
VCX3B-204ENST00000453306 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
VCX3B-204ENST00000453306 PSG8Q9UQ74 426 aa11.33□□□□□ -0.6
VCX3B-204ENST00000453306 RBFOX3A6NFN3 312 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 KLLNB2CW77 178 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 C9JQL5 133 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 SRSF3P84103 164 aaKnown RBP11.32□□□□□ -0.6
VCX3B-204ENST00000453306 GFI1BQ5VTD9 330 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 HIST1H2BAQ96A08 127 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 C11orf52Q96A22 123 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 IGF2BP2-AS1Q96M15 143 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 VAX2Q9UIW0 290 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 X6R8D5 127 aa11.32□□□□□ -0.6
VCX3B-204ENST00000453306 SPRY2O43597 315 aa11.31□□□□□ -0.6
VCX3B-204ENST00000453306 CDKN1BP46527 198 aa11.31□□□□□ -0.6
VCX3B-204ENST00000453306 MEF2BQ02080 365 aaPredicted RBP11.31□□□□□ -0.6
VCX3B-204ENST00000453306 BTN1A1Q13410 526 aa11.31□□□□□ -0.6
VCX3B-204ENST00000453306 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
VCX3B-204ENST00000453306 TMEM78Q5T7P6 136 aa11.31□□□□□ -0.6
VCX3B-204ENST00000453306 ZNF705AQ6ZN79 300 aaPredicted RBP11.31□□□□□ -0.6
VCX3B-204ENST00000453306 C8orf49Q96NF6 230 aa11.31□□□□□ -0.6
VCX3B-204ENST00000453306 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
VCX3B-204ENST00000453306 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
VCX3B-204ENST00000453306 ZNF80P51504 273 aaPredicted RBP11.3□□□□□ -0.6
VCX3B-204ENST00000453306 NUTF2P61970 127 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms