RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.44□□□□□ -1.06
NDUFA3-209ENST00000451517 DYNLRB2Q8TF09 96 aa8.44□□□□□ -1.06
NDUFA3-209ENST00000451517 PRR25Q96S07 402 aa8.44□□□□□ -1.06
NDUFA3-209ENST00000451517 AGPAT4-IT1Q9H0P7 198 aa8.44□□□□□ -1.06
NDUFA3-209ENST00000451517 RNASE7Q9H1E1 156 aaKnown RBP8.44□□□□□ -1.06
NDUFA3-209ENST00000451517 PPP1R14DQ9NXH3 145 aa8.44□□□□□ -1.06
NDUFA3-209ENST00000451517 V9GYV3 84 aa8.44□□□□□ -1.06
NDUFA3-209ENST00000451517 C19orf71A6NCJ1 209 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 NPIPB6E9PJ23 425 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 PFN1P07737 140 aaKnown RBP8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 PAFAH1B2P68402 229 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 ERCC8Q13216 396 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 ELOBQ15370 118 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 IBA57Q5T440 356 aaKnown RBP8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 FAM24BQ8N5W8 94 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 Q8TAT8 98 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 IMMP2LQ96T52 175 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 ASCL2Q99929 193 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 CITED1Q99966 193 aa8.43□□□□□ -1.06
NDUFA3-209ENST00000451517 SETD2Q9BYW2 2564 aaPredicted RBP8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 TFPI2P48307 235 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 ZNF138P52744 262 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 LINC00322Q6ZN03 302 aaPredicted RBP8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 TMEM61Q8N0U2 210 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 NUDT10Q8NFP7 164 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 OR8A1Q8NGG7 326 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 NUDT11Q96G61 164 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 GPR61Q9BZJ8 451 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 IL36BQ9NZH7 164 aa8.42□□□□□ -1.06
NDUFA3-209ENST00000451517 GATCO43716 136 aaKnown RBP8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 ZNF688P0C7X2 276 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 S100PP25815 95 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 CRIP1P50238 77 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 SNRPD3P62318 126 aaKnown RBP8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 KRTAP24-1Q3LI83 254 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 CD300EQ496F6 205 aaPredicted RBP8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 RBPMS2Q6ZRY4 209 aaKnown RBP8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 OR10J6PQ8NGY7 276 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 PYGO2Q9BRQ0 406 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 NDFIP1Q9BT67 221 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 URGCP-MRPS24S4R325 110 aa8.41□□□□□ -1.06
NDUFA3-209ENST00000451517 NIPBLQ6KC79 2804 aaeCLIP8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 TRBV24-1A0A075B6N3 115 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 ZNF705GA8MUZ8 300 aaPredicted RBP8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 CXCL1P09341 107 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 ZNF705DP0CH99 300 aaPredicted RBP8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 ZNF705BP0CI00 300 aaPredicted RBP8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 CT45A10P0DMU9 189 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 DEFB1P60022 68 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 SMUG1Q53HV7 270 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 CT83Q5H943 113 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 LINC00482Q8N8I6 264 aa8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 SPAG8Q99932 426 aaPredicted RBP8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
NDUFA3-209ENST00000451517 TGIF2-C20orf24A0A0A6YYL0 155 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 TRBV7-9A0A0J9YWB2 115 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 F6UB75 175 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 SH2D1AO60880 128 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 P01737 135 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 PF4P02776 101 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 HIST1H1AQ02539 215 aaPredicted RBP8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 OR4B1Q8NGF8 309 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 DAZAP1Q96EP5 407 aaKnown RBP8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 FAM19A4Q96LR4 140 aa8.39□□□□□ -1.07
NDUFA3-209ENST00000451517 TRAV9-1A0A075B6T8 112 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 A0A0J9YX75 114 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 IZUMO1RA6ND01 250 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 OR4C46A6NHA9 309 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 CA1P00915 261 aaPredicted RBP8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 IGLV1-51P01701 117 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 RAB5AP20339 215 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 ZNF80P51504 273 aaPredicted RBP8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 FAM3BP58499 235 aaPredicted RBP8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 GDF5OSQ5U4N7 250 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 PRIMA1Q86XR5 153 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 FAM210BQ96KR6 192 aa8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
NDUFA3-209ENST00000451517 A0A1W2PPQ1 181 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 SAP30O75446 220 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 TYMSP04818 313 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 CRISP2P16562 243 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 FOXI2Q6ZQN5 318 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 ZFAND2AQ8N6M9 145 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 OR2D3Q8NGH3 330 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 TSKUQ8WUA8 353 aa8.37□□□□□ -1.07
NDUFA3-209ENST00000451517 BTF3L4Q96K17 158 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 283.5 ms