RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GAGE12IP0CL82 117 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 ATP5G3P48201 142 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 UBE2L3P68036 154 aaKnown RBP6.83□□□□□ -1.32
USP54-207ENST00000451492 PDE6HQ13956 83 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 TMEM78Q5T7P6 136 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 Q8TAT8 98 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 RNF141Q8WVD5 230 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 MRPL53Q96EL3 112 aaKnown RBP6.83□□□□□ -1.32
USP54-207ENST00000451492 PRELID1Q9Y255 219 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 DNAH2Q9P225 4427 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 C7orf71A4D174 169 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 NBEAP1P0C6P0 100 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
USP54-207ENST00000451492 RANP62826 216 aaKnown RBP6.82□□□□□ -1.32
USP54-207ENST00000451492 CD300CQ08708 224 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 PRR9Q5T870 116 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 FXYD5Q96DB9 178 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 FAM210BQ96KR6 192 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 ODF3Q96PU9 254 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 VGLL1Q99990 258 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 ATG101Q9BSB4 218 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 AGPAT4-IT1Q9H0P7 198 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 WFDC1Q9HC57 220 aa6.82□□□□□ -1.32
USP54-207ENST00000451492 A0A0J9YY99 117 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 CBY3A6NI87 242 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 HMGB3O15347 200 aaKnown RBP6.81□□□□□ -1.32
USP54-207ENST00000451492 PTTG1O95997 202 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 SLC25A5P05141 298 aaKnown RBP6.81□□□□□ -1.32
USP54-207ENST00000451492 GPX1P07203 203 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 RAB2AP61019 212 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 OR5I1Q13606 314 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 KHDC3LQ587J8 217 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 Q6ZQT7 251 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 ZNF493Q6ZR52 646 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 ZNF503Q96F45 646 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 HYLS1Q96M11 299 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 MED28Q9H204 178 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 Q9H3A6 140 aa6.81□□□□□ -1.32
USP54-207ENST00000451492 RGS13O14921 159 aa6.8□□□□□ -1.32
USP54-207ENST00000451492 CSN1S1P47710 185 aa6.8□□□□□ -1.32
USP54-207ENST00000451492 HSD17B11Q8NBQ5 300 aa6.8□□□□□ -1.32
USP54-207ENST00000451492 LINC00477Q96M19 166 aa6.8□□□□□ -1.32
USP54-207ENST00000451492 PYGO2Q9BRQ0 406 aa6.8□□□□□ -1.32
USP54-207ENST00000451492 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
USP54-207ENST00000451492 GSN-AS1Q9NRJ2 163 aa6.8□□□□□ -1.32
USP54-207ENST00000451492 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 A0A1W2PPV4 95 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 KLLNB2CW77 178 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 TAS2R45P59539 299 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 ACOT6Q3I5F7 207 aaPredicted RBP6.79□□□□□ -1.32
USP54-207ENST00000451492 MUC21Q5SSG8 566 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 Q6ZTI0 123 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 EIF4E3Q8N5X7 224 aaKnown RBP6.79□□□□□ -1.32
USP54-207ENST00000451492 FAM19A4Q96LR4 140 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 TP53TG3Q9ULZ0 132 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
USP54-207ENST00000451492 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 TRAV26-1A0A087WT03 109 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 FXYD6-FXYD2A0A087WZ82 144 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 M6PRP20645 277 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 HOXA5P20719 270 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 ZNF138P52744 262 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 GNG5P63218 68 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 RNF212Q495C1 297 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 C9orf47Q6ZRZ4 202 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 ZNF680Q8NEM1 530 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 OR10G4Q8NGN3 311 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 OR10G9Q8NGN4 311 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 OR10G7Q8NGN6 311 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 GNPNAT1Q96EK6 184 aaPredicted RBP6.78□□□□□ -1.32
USP54-207ENST00000451492 ARPC5LQ9BPX5 153 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 MRPL16Q9NX20 251 aaKnown RBP6.78□□□□□ -1.32
USP54-207ENST00000451492 ZNF492Q9P255 531 aa6.78□□□□□ -1.32
USP54-207ENST00000451492 IGHV1OR15-1A0A075B7D0 117 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 PGPA6NDG6 321 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 PRSS29PA6NIE9 313 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 RTL8CO15255 209 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 ZNF324O75467 553 aaPredicted RBP6.77□□□□□ -1.33
USP54-207ENST00000451492 IGHV3-53P01767 116 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 CRISP2P16562 243 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 CDC34P49427 236 aaPredicted RBP6.77□□□□□ -1.33
USP54-207ENST00000451492 Q5BKY6 102 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 IQCF2Q8IXL9 164 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 C11orf72Q8NBR9 251 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 CMTM2Q8TAZ6 248 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 SH3BGRL3Q9H299 93 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 NAGKQ9UJ70 344 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 KLF12Q9Y4X4 402 aa6.77□□□□□ -1.33
USP54-207ENST00000451492 DIRC3C9JPN6 131 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 F6UZH7 168 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 ARL14EPLP0DKL9 152 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 ATP6V0CP27449 155 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 CCL18P55774 89 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 ZNF266Q14584 549 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 LGALS9BQ3B8N2 356 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 GOLT1AQ6ZVE7 132 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 318.7 ms