RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
VPS33A-202ENST00000451053 RBAKDNA6NC62 111 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 ZNF727A8MUV8 499 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 F6UB75 175 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 F8W036 122 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 RPL35AP18077 110 aaKnown RBP9.61□□□□□ -0.87
VPS33A-202ENST00000451053 TAS2R60P59551 318 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 GNG5P63218 68 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 GOLT1AQ6ZVE7 132 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 TMEM75Q8N9X5 138 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 SMIM7Q9BQ49 75 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 SEC11CQ9BY50 192 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 PARLQ9H300 379 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 MEGF8Q7Z7M0 2845 aa9.61□□□□□ -0.87
VPS33A-202ENST00000451053 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
VPS33A-202ENST00000451053 ZNF705FA8MVS1 300 aaPredicted RBP9.6□□□□□ -0.87
VPS33A-202ENST00000451053 RPL35P42766 123 aaKnown RBP9.6□□□□□ -0.87
VPS33A-202ENST00000451053 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
VPS33A-202ENST00000451053 ZNF674Q2M3X9 581 aa9.6□□□□□ -0.87
VPS33A-202ENST00000451053 FOXI2Q6ZQN5 318 aa9.6□□□□□ -0.87
VPS33A-202ENST00000451053 TRPT1Q86TN4 253 aaKnown RBP9.6□□□□□ -0.87
VPS33A-202ENST00000451053 STHQ8IWL8 128 aa9.6□□□□□ -0.87
VPS33A-202ENST00000451053 OR10J6PQ8NGY7 276 aa9.6□□□□□ -0.87
VPS33A-202ENST00000451053 SAV1Q9H4B6 383 aaPredicted RBP9.6□□□□□ -0.87
VPS33A-202ENST00000451053 KLF12Q9Y4X4 402 aa9.6□□□□□ -0.87
VPS33A-202ENST00000451053 LOC102724200A0A096LPH7 203 aaPredicted RBP9.59□□□□□ -0.87
VPS33A-202ENST00000451053 A0A0J9YX75 114 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 C9JCJ5 164 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 H3BMM0 161 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 ZNF705DP0CH99 300 aaPredicted RBP9.59□□□□□ -0.87
VPS33A-202ENST00000451053 ZNF705BP0CI00 300 aaPredicted RBP9.59□□□□□ -0.87
VPS33A-202ENST00000451053 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 EBLN2Q6P2I7 272 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 SBSPONQ8IVN8 264 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 ASCL2Q99929 193 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
VPS33A-202ENST00000451053 S100A1P23297 94 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 GNG4P50150 75 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 FLI1Q01543 452 aaPredicted RBP9.58□□□□□ -0.88
VPS33A-202ENST00000451053 C10orf91Q5T1B1 145 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 TMEM78Q5T7P6 136 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 C9orf47Q6ZRZ4 202 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 NAT8Q9UHE5 227 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 CARHSP1Q9Y2V2 147 aaKnown RBP9.58□□□□□ -0.88
VPS33A-202ENST00000451053 LY96Q9Y6Y9 160 aa9.58□□□□□ -0.88
VPS33A-202ENST00000451053 IGKV2-40A0A087WW87 121 aaPredicted RBP9.57□□□□□ -0.88
VPS33A-202ENST00000451053 DUSP14O95147 198 aaKnown RBP9.57□□□□□ -0.88
VPS33A-202ENST00000451053 IGKV2D-40P01614 121 aaPredicted RBP9.57□□□□□ -0.88
VPS33A-202ENST00000451053 IGKV3-20P01619 116 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 HIST1H1AQ02539 215 aaPredicted RBP9.57□□□□□ -0.88
VPS33A-202ENST00000451053 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
VPS33A-202ENST00000451053 TMEM241Q24JQ0 296 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 Q86TA4 180 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 OR8A1Q8NGG7 326 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 LINC00477Q96M19 166 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 NDFIP1Q9BT67 221 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 PSG8Q9UQ74 426 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 ZFP30Q9Y2G7 519 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 AGRNO00468 2067 aa9.57□□□□□ -0.88
VPS33A-202ENST00000451053 TRAV34A0A0B4J273 112 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 NPIPB6E9PJ23 425 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 ADCYAP1P18509 176 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 APOC4P55056 127 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 PRNTQ86SH4 94 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 OR4B1Q8NGF8 309 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 IGF2BP2-AS1Q96M15 143 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 LENEPQ9Y5L5 61 aa9.56□□□□□ -0.88
VPS33A-202ENST00000451053 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 KIR2DL5BA0A0G2JN68 375 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 KIR2DL5BA0A0G2JPC4 375 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 TRBV7-9A0A0J9YWB2 115 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 A8MTW9 85 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 LTAP01374 205 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 ZNF138P52744 262 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 BAGE2Q86Y30 109 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 KIR2DL5AQ8N109 375 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 SVBPQ8N300 66 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 KIR2DL5BQ8NHK3 375 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 TVP23CQ96ET8 276 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 VGLL1Q99990 258 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 CSTL1Q9H114 145 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 PPP1R14DQ9NXH3 145 aa9.55□□□□□ -0.88
VPS33A-202ENST00000451053 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 CA1P00915 261 aaPredicted RBP9.54□□□□□ -0.88
VPS33A-202ENST00000451053 APOC3P02656 99 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 GIG44P09565 113 aaPredicted RBP9.54□□□□□ -0.88
VPS33A-202ENST00000451053 FXYD7P58549 80 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 ERCC8Q13216 396 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 AMTNQ6UX39 209 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms