RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ZNF124Q15973 351 aa14.51□□□□□ -0.09
SGCE-207ENST00000447873 FAM74A3Q4VXF1 159 aa14.51□□□□□ -0.09
SGCE-207ENST00000447873 TMEM78Q5T7P6 136 aa14.51□□□□□ -0.09
SGCE-207ENST00000447873 C9orf47Q6ZRZ4 202 aa14.51□□□□□ -0.09
SGCE-207ENST00000447873 AGPAT4-IT1Q9H0P7 198 aa14.51□□□□□ -0.09
SGCE-207ENST00000447873 PSG8Q9UQ74 426 aa14.51□□□□□ -0.09
SGCE-207ENST00000447873 ACTL10Q5JWF8 245 aa14.5□□□□□ -0.09
SGCE-207ENST00000447873 PRNTQ86SH4 94 aa14.5□□□□□ -0.09
SGCE-207ENST00000447873 ZMAT5Q9UDW3 170 aaKnown RBP14.5□□□□□ -0.09
SGCE-207ENST00000447873 KNCNA6PVL3 124 aa14.49□□□□□ -0.09
SGCE-207ENST00000447873 NPIPB6E9PJ23 425 aa14.49□□□□□ -0.09
SGCE-207ENST00000447873 LINC00477Q96M19 166 aa14.49□□□□□ -0.09
SGCE-207ENST00000447873 AGRNO00468 2067 aa14.49□□□□□ -0.09
SGCE-207ENST00000447873 DUSP14O95147 198 aaKnown RBP14.48□□□□□ -0.09
SGCE-207ENST00000447873 GNG4P50150 75 aa14.48□□□□□ -0.09
SGCE-207ENST00000447873 CENPWQ5EE01 88 aa14.48□□□□□ -0.09
SGCE-207ENST00000447873 Q86TA4 180 aa14.48□□□□□ -0.09
SGCE-207ENST00000447873 Q8TAT8 98 aa14.48□□□□□ -0.09
SGCE-207ENST00000447873 C19orf73Q9NVV2 129 aa14.48□□□□□ -0.09
SGCE-207ENST00000447873 TRBV20OR9-2A0A075B6H5 130 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 TRBV6-1A0A0K0K1D8 114 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 KRBOX1C9JBD0 128 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 G3V4G9 280 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 HLA-DRB4P13762 266 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 ADCYAP1P18509 176 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 ZNF138P52744 262 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 EGFEM1PQ0D2K5 195 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 BAGE2Q86Y30 109 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 OR4B1Q8NGF8 309 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 NIPSNAP3BQ9BS92 247 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 SEC11CQ9BY50 192 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 HLA-DRB4X5D2U9 266 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 C9JCJ5 164 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 LTAP01374 205 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 IGF2BP2-AS1Q96M15 143 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 ASCL2Q99929 193 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 NDFIP1Q9BT67 221 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 WFDC10AQ9H1F0 79 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 PPP1R14DQ9NXH3 145 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 ZNF492Q9P255 531 aa14.47□□□□□ -0.09
SGCE-207ENST00000447873 H3BMM0 161 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 IGKV3-20P01619 116 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 TMEM241Q24JQ0 296 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 SAPCD1Q5SSQ6 148 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 SAMD5Q5TGI4 173 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 STHQ8IWL8 128 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 NAT8Q9UHE5 227 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 ZFP30Q9Y2G7 519 aa14.46□□□□□ -0.09
SGCE-207ENST00000447873 PGPEP1LA6NFU8 196 aa14.45□□□□□ -0.1
SGCE-207ENST00000447873 CT45A10P0DMU9 189 aa14.45□□□□□ -0.1
SGCE-207ENST00000447873 KRTAP10-11P60412 298 aa14.45□□□□□ -0.1
SGCE-207ENST00000447873 NHLRC2Q8NBF2 726 aa14.45□□□□□ -0.1
SGCE-207ENST00000447873 PRR25Q96S07 402 aa14.45□□□□□ -0.1
SGCE-207ENST00000447873 C10orf91Q5T1B1 145 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 TMEM183AQ8IXX5 376 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 DEFB125Q8N687 156 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 TVP23CQ96ET8 276 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 AURKAIP1Q9NWT8 199 aaPredicted RBP14.43□□□□□ -0.1
SGCE-207ENST00000447873 LENEPQ9Y5L5 61 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 MGAM2Q2M2H8 2515 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 ATP6V1G1O75348 118 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 Q8N1Y9 231 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 OCC1Q8TAD7 63 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 SMIM12Q96EX1 92 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 LY96Q9Y6Y9 160 aa14.43□□□□□ -0.1
SGCE-207ENST00000447873 IGLV2-8P01709 118 aa14.42□□□□□ -0.1
SGCE-207ENST00000447873 MGST1P10620 155 aaKnown RBP14.42□□□□□ -0.1
SGCE-207ENST00000447873 C8orf49Q96NF6 230 aa14.42□□□□□ -0.1
SGCE-207ENST00000447873 ODF3Q96PU9 254 aa14.42□□□□□ -0.1
SGCE-207ENST00000447873 MLST8Q9BVC4 326 aa14.42□□□□□ -0.1
SGCE-207ENST00000447873 SDF2L1Q9HCN8 221 aa14.42□□□□□ -0.1
SGCE-207ENST00000447873 CARHSP1Q9Y2V2 147 aaKnown RBP14.42□□□□□ -0.1
SGCE-207ENST00000447873 TRBV7-9A0A0J9YWB2 115 aa14.41□□□□□ -0.1
SGCE-207ENST00000447873 ADIRFQ15847 76 aa14.41□□□□□ -0.1
SGCE-207ENST00000447873 LINC01551Q86U37 167 aa14.41□□□□□ -0.1
SGCE-207ENST00000447873 FAM19A4Q96LR4 140 aa14.41□□□□□ -0.1
SGCE-207ENST00000447873 NOTCH1P46531 2555 aa14.4□□□□□ -0.1
SGCE-207ENST00000447873 A8MTW9 85 aa14.4□□□□□ -0.1
SGCE-207ENST00000447873 APOC3P02656 99 aa14.4□□□□□ -0.1
SGCE-207ENST00000447873 TSPOP30536 169 aa14.4□□□□□ -0.1
SGCE-207ENST00000447873 LEPP41159 167 aa14.4□□□□□ -0.1
SGCE-207ENST00000447873 RPL23P62829 140 aaKnown RBP14.4□□□□□ -0.1
SGCE-207ENST00000447873 AMTNQ6UX39 209 aa14.4□□□□□ -0.1
SGCE-207ENST00000447873 TRPT1Q86TN4 253 aaKnown RBP14.4□□□□□ -0.1
SGCE-207ENST00000447873 CLUHP3Q96NS8 147 aa14.4□□□□□ -0.1
SGCE-207ENST00000447873 RBMY1BA6NDE4 496 aaKnown RBP14.39□□□□□ -0.11
SGCE-207ENST00000447873 RBMY1EA6NEQ0 496 aaKnown RBP14.39□□□□□ -0.11
SGCE-207ENST00000447873 J3KRW8 73 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 RBMY1DP0C7P1 496 aaKnown RBP14.39□□□□□ -0.11
SGCE-207ENST00000447873 PNRC1Q12796 327 aaPredicted RBP14.39□□□□□ -0.11
SGCE-207ENST00000447873 SMUG1Q53HV7 270 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 SRD5A3Q9H8P0 318 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 NBEAL1Q6ZS30 2694 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 K7EN84 100 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 GPX1P07203 203 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 CRISP2P16562 243 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 CDKN1BP46527 198 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 SPINK13Q1W4C9 94 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 PRR27Q6MZM9 219 aa14.39□□□□□ -0.11
SGCE-207ENST00000447873 ZC2HC1AQ96GY0 325 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms