RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 LOC107984156A0A0G2JMH3 177 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 C3orf85A0A1B0GTC6 90 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 C2orf70A6NJV1 201 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 BBIP1A8MTZ0 92 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 M0R129 80 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 ERC2-IT1O76042 136 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 PYYP10082 97 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 MRPS10P82664 201 aaKnown RBP1.98□□□□□ -2.09
PMS1-216ENST00000447734 HCP5Q6MZN7 132 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 ARL17AQ8IVW1 177 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 ATOH7Q8N100 152 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 TCTEX1D1Q8N7M0 179 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 OTOSQ8NHW6 89 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 TCEAL7Q9BRU2 100 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 LSM2Q9Y333 95 aaKnown RBP1.98□□□□□ -2.09
PMS1-216ENST00000447734 GLI3P10071 1580 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 COL1A2P08123 1366 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 TMEM2Q9UHN6 1383 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 GRIN2AQ12879 1464 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 TRBV20-1A0A075B6N2 111 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 IGHV1-24A0A0C4DH33 117 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 APODP05090 189 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 CD2P06729 351 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 BRS3P32247 399 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 ASB16-AS1Q495Z4 193 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 OCIAD2Q56VL3 154 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 LYPD1Q8N2G4 141 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 SPACA4Q8TDM5 124 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 PSMF1Q92530 271 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 Q96M85 177 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 PDCD10Q9BUL8 212 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 TTTY12Q9BZ98 90 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 SAR1AQ9NR31 198 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 MYO9BQ13459 2157 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 SDK2Q58EX2 2172 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 ARHGAP31Q2M1Z3 1444 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 STRCQ7RTU9 1775 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 MPDZO75970 2070 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 DIDO1Q9BTC0 2240 aaKnown RBP1.97□□□□□ -2.09
PMS1-216ENST00000447734 PLXNA3P51805 1871 aa1.97□□□□□ -2.09
PMS1-216ENST00000447734 MICAL3Q7RTP6 2002 aa1.96□□□□□ -2.09
PMS1-216ENST00000447734 RIMS1Q86UR5 1692 aaKnown RBP1.96□□□□□ -2.1
PMS1-216ENST00000447734 PXDNLA1KZ92 1463 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 NUMA1Q14980 2115 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 NCKAP5O14513 1909 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 C9orf170A2RU37 121 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 PRB2P02812 416 aaPredicted RBP1.96□□□□□ -2.1
PMS1-216ENST00000447734 PDE6HQ13956 83 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 CCSMST1Q4G0I0 132 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 MEIG1Q5JSS6 88 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 IDO2Q6ZQW0 420 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 LINC00269Q8N2A0 174 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 KCNRGQ8N5I3 272 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.96□□□□□ -2.1
PMS1-216ENST00000447734 CIB3Q96Q77 187 aaPredicted RBP1.96□□□□□ -2.1
PMS1-216ENST00000447734 SMIM7Q9BQ49 75 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 MPC1Q9Y5U8 109 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 RGS12O14924 1447 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 NAIPQ13075 1403 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 NALCNQ8IZF0 1738 aa1.96□□□□□ -2.1
PMS1-216ENST00000447734 HEATR5BQ9P2D3 2071 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 MYH7P12883 1935 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 UHRF1BP1LA0JNW5 1464 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 ZNF518AQ6AHZ1 1483 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 RP1P56715 2156 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 ZNF736B4DX44 427 aaPredicted RBP1.95□□□□□ -2.1
PMS1-216ENST00000447734 CORTO00230 105 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 EDF1O60869 148 aaKnown RBP1.95□□□□□ -2.1
PMS1-216ENST00000447734 CXCL8P10145 99 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 FGF7P21781 194 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 SCIMPQ6UWF3 145 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 FAM19A2Q8N3H0 131 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 Q8TAT8 98 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 ZNF431Q8TF32 576 aaPredicted RBP1.95□□□□□ -2.1
PMS1-216ENST00000447734 DPH3Q96FX2 82 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 TXNDC17Q9BRA2 123 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 PSMG3Q9BT73 122 aaPredicted RBP1.95□□□□□ -2.1
PMS1-216ENST00000447734 SCN3BQ9NY72 215 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 CHCHD2Q9Y6H1 151 aaPredicted RBP1.95□□□□□ -2.1
PMS1-216ENST00000447734 SCN3AQ9NY46 2000 aa1.95□□□□□ -2.1
PMS1-216ENST00000447734 MGAMO43451 1857 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 PHLPP1O60346 1717 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 EIF4G3O43432 1585 aaKnown RBP1.94□□□□□ -2.1
PMS1-216ENST00000447734 COL11A1P12107 1806 aaPredicted RBP1.94□□□□□ -2.1
PMS1-216ENST00000447734 ADAMTS7Q9UKP4 1686 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 MYH1P12882 1939 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 LOC100130705A0A1B0GUX0 176 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 M0R2P5 195 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 AKAIN1P0CW23 69 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 C1orf137Q5JT78 98 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 GKN2Q86XP6 184 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 Q8N2B8 174 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 C4orf3Q8WVX3 66 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 PRO0461Q9UI25 63 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 FAM135AQ9P2D6 1515 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms