RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 Q8TAT8 98 aa13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 EIF5A2Q9GZV4 153 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 RBAKDNA6NC62 111 aa13.21□□□□□ -0.29
TRAPPC4-203ENST00000447216 A8MZ25 164 aa13.21□□□□□ -0.29
TRAPPC4-203ENST00000447216 TAGLN2P37802 199 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-203ENST00000447216 TMEM78Q5T7P6 136 aa13.21□□□□□ -0.29
TRAPPC4-203ENST00000447216 LINC00322Q6ZN03 302 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-203ENST00000447216 HIST1H2BAQ96A08 127 aa13.21□□□□□ -0.29
TRAPPC4-203ENST00000447216 PPP1R14DQ9NXH3 145 aa13.21□□□□□ -0.29
TRAPPC4-203ENST00000447216 F6UZH7 168 aa13.2□□□□□ -0.3
TRAPPC4-203ENST00000447216 K7EQM0 130 aa13.2□□□□□ -0.3
TRAPPC4-203ENST00000447216 AKR1C3P42330 323 aa13.2□□□□□ -0.3
TRAPPC4-203ENST00000447216 LINC00477Q96M19 166 aa13.2□□□□□ -0.3
TRAPPC4-203ENST00000447216 TXNDC17Q9BRA2 123 aa13.2□□□□□ -0.3
TRAPPC4-203ENST00000447216 SERTM2A0A1B0GWG4 89 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 J3KRW8 73 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 M0R2Z0 102 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 IGLV2-11P01706 119 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 ZNF138P52744 262 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 SRSF3P84103 164 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 C2CD4CQ8TF44 421 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 C11orf52Q96A22 123 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 CLUHP3Q96NS8 147 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 TCEAL7Q9BRU2 100 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 ZNF492Q9P255 531 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 PSG8Q9UQ74 426 aa13.19□□□□□ -0.3
TRAPPC4-203ENST00000447216 PDE6DO43924 150 aa13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 GIG44P09565 113 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 FLI1Q01543 452 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 KIR3DS1Q14943 382 aa13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 TMEM75Q8N9X5 138 aa13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 DERL1Q9BUN8 251 aa13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 CSTL1Q9H114 145 aa13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 MEGF8Q7Z7M0 2845 aa13.18□□□□□ -0.3
TRAPPC4-203ENST00000447216 CA1P00915 261 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-203ENST00000447216 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
TRAPPC4-203ENST00000447216 MED9Q9NWA0 146 aa13.17□□□□□ -0.3
TRAPPC4-203ENST00000447216 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
TRAPPC4-203ENST00000447216 TRAV12-2A0A075B6T6 113 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 C9JQL5 133 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 CEBPGP53567 150 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 APOC4P55056 127 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 UBE2G1P62253 170 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 MORN3Q6PF18 240 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 Q86TA4 180 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 FAM19A4Q96LR4 140 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 KLF12Q9Y4X4 402 aa13.16□□□□□ -0.3
TRAPPC4-203ENST00000447216 KIR2DL5BA0A0G2JN68 375 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 KIR2DL5BA0A0G2JPC4 375 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 LEPP41159 167 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 PRR9Q5T870 116 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 KIR2DL5AQ8N109 375 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
TRAPPC4-203ENST00000447216 RAB19A4D1S5 217 aa13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 CRXO43186 299 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 PEA15Q15121 130 aa13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 ZFAND2AQ8N6M9 145 aa13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 NBEAL2Q6ZNJ1 2754 aa13.14□□□□□ -0.31
TRAPPC4-203ENST00000447216 PRKDCP78527 4128 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 TMEM250H0YL14 139 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 CRISP2P16562 243 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 TSPOP30536 169 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 CDKN1BP46527 198 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 BTN1A1Q13410 526 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 ZNF674Q2M3X9 581 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 COMMD7Q86VX2 200 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 NDFIP1Q9BT67 221 aa13.13□□□□□ -0.31
TRAPPC4-203ENST00000447216 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 LINC00862A6NCI5 91 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 FBLL1A6NHQ2 334 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 S100A9P06702 114 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 GPX1P07203 203 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 RNASE4P34096 147 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 DEFB135Q30KP9 77 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 GFI1BQ5VTD9 330 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 NHLRC2Q8NBF2 726 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 PARLQ9H300 379 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 RETNQ9HD89 108 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
TRAPPC4-203ENST00000447216 DNAH9Q9NYC9 4486 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 KLLNB2CW77 178 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 UBE2CO00762 179 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 LTAP01374 205 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 AMBPP02760 352 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
TRAPPC4-203ENST00000447216 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms