RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 D6R8Y8 96 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 HSPB8Q9UJY1 196 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 IGHV3OR16-13A0A075B7E8 117 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 IGHV3-74A0A0B4J1X5 117 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 NDUFS8O00217 210 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 BATFQ16520 125 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 MAP1LC3CQ9BXW4 147 aa13.71□□□□□ -0.21
CLDN9-201ENST00000445369 CACNA1BQ00975 2339 aa13.71□□□□□ -0.22
CLDN9-201ENST00000445369 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 FABP5P3A8MUU1 101 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 TSPOP30536 169 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 PET117Q6UWS5 81 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 FA2HQ7L5A8 372 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 LINC00527Q9UJ94 153 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 MUC21A0A0G2JKD1 596 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 MUC21A0A140T8X8 626 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 ZNF207O43670 478 aaKnown RBP13.7□□□□□ -0.22
CLDN9-201ENST00000445369 LINC01559Q495D7 138 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 MRPL51Q4U2R6 128 aaKnown RBP13.7□□□□□ -0.22
CLDN9-201ENST00000445369 MUC21Q5SSG8 566 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 ORMDL3Q8N138 153 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 PRSS3P2Q8NHM4 247 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 MRPL53Q96EL3 112 aaKnown RBP13.7□□□□□ -0.22
CLDN9-201ENST00000445369 CNFNQ9BYD5 112 aa13.7□□□□□ -0.22
CLDN9-201ENST00000445369 IGHV3-49A0A0A0MS15 119 aa13.69□□□□□ -0.22
CLDN9-201ENST00000445369 IGHV4-38-2P0DP08 117 aa13.69□□□□□ -0.22
CLDN9-201ENST00000445369 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
CLDN9-201ENST00000445369 PRELID3AQ96N28 172 aa13.69□□□□□ -0.22
CLDN9-201ENST00000445369 TMEM191AQ9H0A3 160 aa13.69□□□□□ -0.22
CLDN9-201ENST00000445369 MRPS16Q9Y3D3 137 aaKnown RBP13.69□□□□□ -0.22
CLDN9-201ENST00000445369 ZFHX3Q15911 3703 aa13.69□□□□□ -0.22
CLDN9-201ENST00000445369 ORM1P02763 201 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 TRGV3P03979 118 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 IFI27P40305 119 aaPredicted RBP13.68□□□□□ -0.22
CLDN9-201ENST00000445369 TWIST1Q15672 202 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 C8orf86Q6ZUL3 223 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 OR10AG1Q8NH19 301 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 SIGLEC8Q9NYZ4 499 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 LAMTOR2Q9Y2Q5 125 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 IGF1P05019 195 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 CLEC2AQ6UVW9 174 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 AGPAT4-IT1Q9H0P7 198 aa13.68□□□□□ -0.22
CLDN9-201ENST00000445369 IGHV4-30-2A0A087WSY4 118 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 COL5A1-AS1Q5SY13 56 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 ZNF747Q9BV97 191 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 ST20Q9HBF5 79 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 ACACBO00763 2458 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 A0A096LNJ9 63 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 ATP5J2P56134 94 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 LINC01545Q5VT33 79 aa13.67□□□□□ -0.22
CLDN9-201ENST00000445369 ARL3P36405 182 aa13.66□□□□□ -0.22
CLDN9-201ENST00000445369 GLMPQ8WWB7 406 aa13.66□□□□□ -0.22
CLDN9-201ENST00000445369 HIF1ANQ9NWT6 349 aa13.66□□□□□ -0.22
CLDN9-201ENST00000445369 hDV102S1A0JD36 115 aa13.65□□□□□ -0.22
CLDN9-201ENST00000445369 LOXL1Q08397 574 aaPredicted RBP13.65□□□□□ -0.22
CLDN9-201ENST00000445369 LOC389332A0A1B0GUA5 103 aa13.65□□□□□ -0.22
CLDN9-201ENST00000445369 A6NDX4 124 aa13.65□□□□□ -0.22
CLDN9-201ENST00000445369 BRI3O95415 125 aa13.65□□□□□ -0.22
CLDN9-201ENST00000445369 IGHG2P01859 326 aa13.65□□□□□ -0.22
CLDN9-201ENST00000445369 ZNF25P17030 456 aaPredicted RBP13.65□□□□□ -0.22
CLDN9-201ENST00000445369 G0S2P27469 103 aa13.65□□□□□ -0.22
CLDN9-201ENST00000445369 PPIFP30405 207 aaKnown RBP13.65□□□□□ -0.22
CLDN9-201ENST00000445369 HIST1H1AQ02539 215 aaPredicted RBP13.65□□□□□ -0.22
CLDN9-201ENST00000445369 LY6EQ16553 131 aa13.65□□□□□ -0.22
CLDN9-201ENST00000445369 TIMM8BQ9Y5J9 83 aaPredicted RBP13.65□□□□□ -0.22
CLDN9-201ENST00000445369 TMEM78Q5T7P6 136 aa13.64□□□□□ -0.23
CLDN9-201ENST00000445369 C9orf47Q6ZRZ4 202 aa13.64□□□□□ -0.23
CLDN9-201ENST00000445369 STPG4Q8N801 248 aa13.64□□□□□ -0.23
CLDN9-201ENST00000445369 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
CLDN9-201ENST00000445369 MCRIP2Q9BUT9 160 aaKnown RBP13.64□□□□□ -0.23
CLDN9-201ENST00000445369 MSRB1Q9NZV6 116 aa13.64□□□□□ -0.23
CLDN9-201ENST00000445369 IGKV3D-20A0A0C4DH25 116 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 H3BUA1 57 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 H3BUX3 64 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 NPYP01303 97 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 TRBV12-3P01733 135 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 MSMBP08118 114 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 CKS2P33552 79 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 PPP1R14DQ9NXH3 145 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 C11orf21Q9P2W6 132 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 H0Y8G0 127 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 SMKR1H3BMG3 65 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 TFPI2P48307 235 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 UNQ9165/PRO28630Q6UXU0 137 aa13.63□□□□□ -0.23
CLDN9-201ENST00000445369 NDUFA4O00483 81 aa13.62□□□□□ -0.23
CLDN9-201ENST00000445369 C9orf139Q6ZV77 190 aa13.62□□□□□ -0.23
CLDN9-201ENST00000445369 TMEM208Q9BTX3 173 aa13.62□□□□□ -0.23
CLDN9-201ENST00000445369 VPS13CQ709C8 3753 aa13.62□□□□□ -0.23
CLDN9-201ENST00000445369 NCR2O95944 276 aa13.62□□□□□ -0.23
CLDN9-201ENST00000445369 C16orf92Q96LL3 132 aa13.62□□□□□ -0.23
CLDN9-201ENST00000445369 HSBP1L1C9JCN9 74 aa13.61□□□□□ -0.23
CLDN9-201ENST00000445369 SMAD7O15105 426 aaKnown RBP13.61□□□□□ -0.23
CLDN9-201ENST00000445369 USMG5Q96IX5 58 aa13.61□□□□□ -0.23
CLDN9-201ENST00000445369 TP73-AS1Q9UF72 201 aa13.61□□□□□ -0.23
CLDN9-201ENST00000445369 IGSF10Q6WRI0 2623 aa13.61□□□□□ -0.23
CLDN9-201ENST00000445369 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
CLDN9-201ENST00000445369 PMCHL2Q9BQD1 86 aa13.6□□□□□ -0.23
CLDN9-201ENST00000445369 SCRT2Q9NQ03 307 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms