RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CSN1S1P47710 185 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 SERF2P84101 59 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 TMEM78Q5T7P6 136 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 PQLC2Q6ZP29 291 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 HSD17B11Q8NBQ5 300 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
CCDC188-202ENST00000444532 FAM19A4Q96LR4 140 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 NDUFAF3Q9BU61 184 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 TNFSF18Q9UNG2 199 aa13.24□□□□□ -0.29
CCDC188-202ENST00000444532 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
CCDC188-202ENST00000444532 FXYD6-FXYD2A0A087WZ82 144 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 TRAV12-3A0A0B4J271 114 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 RNF222A6NCQ9 220 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 J3KRW8 73 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
CCDC188-202ENST00000444532 NMBP08949 121 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 ATP6V0CP27449 155 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 RAB2AP61019 212 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 CCDC28AQ8IWP9 274 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 RNASE8Q8TDE3 154 aaKnown RBP13.23□□□□□ -0.29
CCDC188-202ENST00000444532 Q9H3A6 140 aa13.23□□□□□ -0.29
CCDC188-202ENST00000444532 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
CCDC188-202ENST00000444532 RBAKDNA6NC62 111 aa13.22□□□□□ -0.29
CCDC188-202ENST00000444532 KLLNB2CW77 178 aa13.22□□□□□ -0.29
CCDC188-202ENST00000444532 MBP02144 154 aa13.22□□□□□ -0.29
CCDC188-202ENST00000444532 CRISP2P16562 243 aa13.22□□□□□ -0.29
CCDC188-202ENST00000444532 VGLL1Q99990 258 aa13.22□□□□□ -0.29
CCDC188-202ENST00000444532 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
CCDC188-202ENST00000444532 hCG_2014768A0A024R1R8 64 aa13.21□□□□□ -0.29
CCDC188-202ENST00000444532 BORCS7-ASMTA0A0B4J1R7 106 aa13.21□□□□□ -0.29
CCDC188-202ENST00000444532 TRBV7-9A0A0J9YWB2 115 aa13.21□□□□□ -0.29
CCDC188-202ENST00000444532 C7orf71A4D174 169 aa13.21□□□□□ -0.29
CCDC188-202ENST00000444532 GPX1P07203 203 aa13.21□□□□□ -0.29
CCDC188-202ENST00000444532 RXFP4Q8TDU9 374 aa13.21□□□□□ -0.29
CCDC188-202ENST00000444532 ZNF492Q9P255 531 aa13.21□□□□□ -0.29
CCDC188-202ENST00000444532 ZNF324O75467 553 aaPredicted RBP13.2□□□□□ -0.3
CCDC188-202ENST00000444532 DEFB130BP0DP73 79 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 DEFB130AP0DP74 79 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 HTN3P15516 51 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 CDC34P49427 236 aaPredicted RBP13.2□□□□□ -0.3
CCDC188-202ENST00000444532 ZNF138P52744 262 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 FAM74A1Q5RGS3 127 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 GNPNAT1Q96EK6 184 aaPredicted RBP13.2□□□□□ -0.3
CCDC188-202ENST00000444532 ST6GAL2Q96JF0 529 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 OTORQ9NRC9 128 aa13.2□□□□□ -0.3
CCDC188-202ENST00000444532 A0A1B0GVG6 124 aa13.19□□□□□ -0.3
CCDC188-202ENST00000444532 EIF3GO75821 320 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC188-202ENST00000444532 RNASE4P34096 147 aaKnown RBP13.19□□□□□ -0.3
CCDC188-202ENST00000444532 CD300CQ08708 224 aa13.19□□□□□ -0.3
CCDC188-202ENST00000444532 RPL7L1Q6DKI1 246 aaKnown RBP13.19□□□□□ -0.3
CCDC188-202ENST00000444532 ARL6IP6Q8N6S5 226 aa13.19□□□□□ -0.3
CCDC188-202ENST00000444532 LINC00467Q9BRT7 94 aa13.19□□□□□ -0.3
CCDC188-202ENST00000444532 HYDINQ4G0P3 5121 aa13.19□□□□□ -0.3
CCDC188-202ENST00000444532 PGPA6NDG6 321 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 CBY3A6NI87 242 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 DIRC3C9JPN6 131 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 TAAR5O14804 337 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 HMGB3O15347 200 aaKnown RBP13.18□□□□□ -0.3
CCDC188-202ENST00000444532 STAG3L2P0CL84 134 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 STAG3L3P0CL85 134 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 ZFAND2AQ8N6M9 145 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 RAB24Q969Q5 203 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 SH3BGRL3Q9H299 93 aa13.18□□□□□ -0.3
CCDC188-202ENST00000444532 NOP10Q9NPE3 64 aaKnown RBP13.18□□□□□ -0.3
CCDC188-202ENST00000444532 SNURFLB1AK76 121 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 ARPC5O15511 151 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 ARL14EPLP0DKL9 152 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 P0DMU3 169 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 FAM231AP0DMU4 169 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 FAM231CP0DMU5 169 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 BTN1A1Q13410 526 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 ACTR3CQ9C0K3 210 aaPredicted RBP13.17□□□□□ -0.3
CCDC188-202ENST00000444532 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
CCDC188-202ENST00000444532 ATP5G1P05496 136 aa13.16□□□□□ -0.3
CCDC188-202ENST00000444532 ATP5G3P48201 142 aa13.16□□□□□ -0.3
CCDC188-202ENST00000444532 EIF4E3Q8N5X7 224 aaKnown RBP13.16□□□□□ -0.3
CCDC188-202ENST00000444532 ZNF680Q8NEM1 530 aa13.16□□□□□ -0.3
CCDC188-202ENST00000444532 SUN5Q8TC36 379 aa13.16□□□□□ -0.3
CCDC188-202ENST00000444532 TMED6Q8WW62 240 aa13.16□□□□□ -0.3
CCDC188-202ENST00000444532 HMSDA8MTL9 139 aa13.15□□□□□ -0.3
CCDC188-202ENST00000444532 DAZ2Q13117 558 aaKnown RBP13.15□□□□□ -0.3
CCDC188-202ENST00000444532 ANXA2RQ3ZCQ2 193 aa13.15□□□□□ -0.3
CCDC188-202ENST00000444532 TMEM88Q6PEY1 159 aa13.15□□□□□ -0.3
CCDC188-202ENST00000444532 LINC00612Q8N6U2 182 aa13.15□□□□□ -0.3
CCDC188-202ENST00000444532 Q8TAT8 98 aa13.15□□□□□ -0.3
CCDC188-202ENST00000444532 CXorf1O96002 111 aa13.14□□□□□ -0.31
CCDC188-202ENST00000444532 GCHFRP30047 84 aa13.14□□□□□ -0.31
CCDC188-202ENST00000444532 PRR9Q5T870 116 aa13.14□□□□□ -0.31
CCDC188-202ENST00000444532 TCTE3Q8IZS6 198 aa13.14□□□□□ -0.31
CCDC188-202ENST00000444532 F5H768 121 aa13.13□□□□□ -0.31
CCDC188-202ENST00000444532 RGS13O14921 159 aa13.13□□□□□ -0.31
CCDC188-202ENST00000444532 POM121L12Q8N7R1 296 aa13.13□□□□□ -0.31
CCDC188-202ENST00000444532 C15orf53Q8NAA6 179 aa13.13□□□□□ -0.31
CCDC188-202ENST00000444532 CYTL1Q9NRR1 136 aa13.13□□□□□ -0.31
CCDC188-202ENST00000444532 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
CCDC188-202ENST00000444532 KCNRGQ8N5I3 272 aa13.12□□□□□ -0.31
CCDC188-202ENST00000444532 C11orf72Q8NBR9 251 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms