RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PGPA6NDG6 321 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 J3KRW8 73 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 GCHFRP30047 84 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 EIF5AP63241 154 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 TMUB2Q71RG4 321 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 AKAP14Q86UN6 197 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 C20orf144Q9BQM9 153 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 TMEM167BQ9NRX6 74 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 GFI1BQ5VTD9 330 aa12.55□□□□□ -0.4
SMARCAL1-209ENST00000444508 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-209ENST00000444508 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
SMARCAL1-209ENST00000444508 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-209ENST00000444508 VGLL1Q99990 258 aa12.55□□□□□ -0.4
SMARCAL1-209ENST00000444508 TEX48A0A1B0GUV7 120 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 RBAKDNA6NC62 111 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 ZNF705GA8MUZ8 300 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 DIRC3C9JPN6 131 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 H7BYZ3 331 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 SLC25A5P05141 298 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 TAS2R60P59551 318 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 KIR3DS1Q14943 382 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 SSX7Q7RTT5 188 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 RPH3ALQ9UNE2 315 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 CELA1Q9UNI1 258 aa12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-209ENST00000444508 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 SPART-AS1P0CW21 52 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 HTN1P15515 57 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 ZNF138P52744 262 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 ZNF726P1Q15940 193 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 SUN5Q8TC36 379 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 NIPSNAP3BQ9BS92 247 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 ZNF492Q9P255 531 aa12.53□□□□□ -0.4
SMARCAL1-209ENST00000444508 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 TRAV12-3A0A0B4J271 114 aa12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 C11orf94C9JXX5 98 aa12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 C1QBP02746 253 aa12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 GPX1P07203 203 aa12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 NMBP08949 121 aa12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 FAM19A4Q96LR4 140 aa12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 DYNC2H1Q8NCM8 4307 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-209ENST00000444508 C7orf71A4D174 169 aa12.51□□□□□ -0.41
SMARCAL1-209ENST00000444508 KLLNB2CW77 178 aa12.51□□□□□ -0.41
SMARCAL1-209ENST00000444508 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
SMARCAL1-209ENST00000444508 CRISP2P16562 243 aa12.51□□□□□ -0.41
SMARCAL1-209ENST00000444508 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-209ENST00000444508 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
SMARCAL1-209ENST00000444508 Q8TAT8 98 aa12.51□□□□□ -0.41
SMARCAL1-209ENST00000444508 TRBV7-9A0A0J9YWB2 115 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 PRM2P04554 102 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 C12orf74Q32Q52 190 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 FAM222AQ5U5X8 452 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 Q6ZTC4 211 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 ZNF767PQ75MW2 155 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 CCDC28AQ8IWP9 274 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 C5orf17Q8NAS9 161 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 STOML3Q8TAV4 291 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 C16orf74Q96GX8 76 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 DKK2Q9UBU2 259 aa12.5□□□□□ -0.41
SMARCAL1-209ENST00000444508 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 AZU1P20160 251 aa12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 BTN1A1Q13410 526 aa12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 LGALSLQ3ZCW2 172 aaPredicted RBP12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 TMED6Q8WW62 240 aa12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 PYGO2Q9BRQ0 406 aa12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
SMARCAL1-209ENST00000444508 SERTM2A0A1B0GWG4 89 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 A0A1W2PRE2 83 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 K7EQM0 130 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 SUMO1P63165 101 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 GNG5P63218 68 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 CD300CQ08708 224 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 ZFAND2AQ8N6M9 145 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 FAM213BQ8TBF2 198 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 C2CD4CQ8TF44 421 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 TMEM263Q8WUH6 116 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 TMPRSS5Q9H3S3 457 aa12.48□□□□□ -0.41
SMARCAL1-209ENST00000444508 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
SMARCAL1-209ENST00000444508 GGTLC3B5MD39 225 aa12.47□□□□□ -0.41
SMARCAL1-209ENST00000444508 TCRAP04437 139 aa12.47□□□□□ -0.41
SMARCAL1-209ENST00000444508 FHITP49789 147 aa12.47□□□□□ -0.41
SMARCAL1-209ENST00000444508 EIF5AL1Q6IS14 154 aaKnown RBP12.47□□□□□ -0.41
SMARCAL1-209ENST00000444508 DPPA3Q6W0C5 159 aa12.47□□□□□ -0.41
SMARCAL1-209ENST00000444508 UBE2G2P60604 165 aa12.46□□□□□ -0.41
SMARCAL1-209ENST00000444508 DAD1P61803 113 aa12.46□□□□□ -0.41
SMARCAL1-209ENST00000444508 ZFP69Q49AA0 526 aa12.46□□□□□ -0.41
SMARCAL1-209ENST00000444508 RNASE8Q8TDE3 154 aaKnown RBP12.46□□□□□ -0.41
SMARCAL1-209ENST00000444508 NKX6-2Q9C056 277 aaPredicted RBP12.46□□□□□ -0.41
SMARCAL1-209ENST00000444508 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
SMARCAL1-209ENST00000444508 LYSTQ99698 3801 aa12.45□□□□□ -0.42
SMARCAL1-209ENST00000444508 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
SMARCAL1-209ENST00000444508 LCE6AA0A183 80 aa12.45□□□□□ -0.42
SMARCAL1-209ENST00000444508 A0A1B0GVG6 124 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms