RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
CCDC197-202ENST00000444118 Q0VG73 95 aa13.23□□□□□ -0.29
CCDC197-202ENST00000444118 Q6YL49 198 aa13.23□□□□□ -0.29
CCDC197-202ENST00000444118 RBPMS2Q6ZRY4 209 aaKnown RBP13.23□□□□□ -0.29
CCDC197-202ENST00000444118 TCF24Q7RTU0 167 aa13.23□□□□□ -0.29
CCDC197-202ENST00000444118 ZNF469Q96JG9 3925 aaPredicted RBP13.23□□□□□ -0.29
CCDC197-202ENST00000444118 A0A1B0GUS0 222 aa13.23□□□□□ -0.29
CCDC197-202ENST00000444118 ESDP10768 282 aa13.23□□□□□ -0.29
CCDC197-202ENST00000444118 CRIP1P50238 77 aa13.23□□□□□ -0.29
CCDC197-202ENST00000444118 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
CCDC197-202ENST00000444118 GLMPQ8WWB7 406 aa13.23□□□□□ -0.29
CCDC197-202ENST00000444118 ITPR2Q14571 2701 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 PSMB8P28062 276 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 HLA-DMBP28068 263 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 LINC00310P59036 64 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 LCN12Q6JVE5 192 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 UNQ9165/PRO28630Q6UXU0 137 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 TMEM256Q8N2U0 113 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 OR2D3Q8NGH3 330 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 TMEM18Q96B42 140 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 PRR25Q96S07 402 aa13.22□□□□□ -0.29
CCDC197-202ENST00000444118 IGHV3-66A0A0C4DH42 116 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 TMEM89A2RUT3 159 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 RBAKDNA6NC62 111 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 ZNF207O43670 478 aaKnown RBP13.21□□□□□ -0.29
CCDC197-202ENST00000444118 SLAQ13239 276 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 IQCJQ1A5X6 159 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 TMEM95Q3KNT9 176 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 SMIM15Q7Z3B0 74 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 MRPL53Q96EL3 112 aaKnown RBP13.21□□□□□ -0.29
CCDC197-202ENST00000444118 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 TLN2Q9Y4G6 2542 aa13.21□□□□□ -0.29
CCDC197-202ENST00000444118 IGHV3OR16-13A0A075B7E8 117 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 IGHV3-74A0A0B4J1X5 117 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 NPSP0C0P6 89 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 CT45A10P0DMU9 189 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 PRB4P10163 310 aaPredicted RBP13.21□□□□□ -0.3
CCDC197-202ENST00000444118 RBX1P62877 108 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 HBBP68871 147 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 IGFL4Q6B9Z1 124 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 ASCL2Q99929 193 aa13.21□□□□□ -0.3
CCDC197-202ENST00000444118 CYSRT1A8MQ03 144 aa13.2□□□□□ -0.3
CCDC197-202ENST00000444118 IGHV3-11P01762 117 aa13.2□□□□□ -0.3
CCDC197-202ENST00000444118 APCSP02743 223 aa13.2□□□□□ -0.3
CCDC197-202ENST00000444118 C8orf86Q6ZUL3 223 aa13.2□□□□□ -0.3
CCDC197-202ENST00000444118 VGLL1Q99990 258 aa13.2□□□□□ -0.3
CCDC197-202ENST00000444118 IGHV3-49A0A0A0MS15 119 aa13.19□□□□□ -0.3
CCDC197-202ENST00000444118 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
CCDC197-202ENST00000444118 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
CCDC197-202ENST00000444118 NUPR1O60356 82 aa13.19□□□□□ -0.3
CCDC197-202ENST00000444118 LCNL1Q6ZST4 164 aa13.19□□□□□ -0.3
CCDC197-202ENST00000444118 CCDC168Q8NDH2 2452 aa13.19□□□□□ -0.3
CCDC197-202ENST00000444118 CLEC5AQ9NY25 188 aa13.19□□□□□ -0.3
CCDC197-202ENST00000444118 FLNAP21333 2647 aaKnown RBP13.19□□□□□ -0.3
CCDC197-202ENST00000444118 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
CCDC197-202ENST00000444118 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
CCDC197-202ENST00000444118 KIAA1644Q3SXP7 199 aa13.18□□□□□ -0.3
CCDC197-202ENST00000444118 FAM162BQ5T6X4 162 aa13.18□□□□□ -0.3
CCDC197-202ENST00000444118 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
CCDC197-202ENST00000444118 PGLYRP4Q96LB8 373 aa13.18□□□□□ -0.3
CCDC197-202ENST00000444118 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
CCDC197-202ENST00000444118 SERF1AO75920 110 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 SRIP30626 198 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 Q6AWC8 147 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 RNF182Q8N6D2 247 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 Q8TAT8 98 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 F2Z2F3 143 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 K7EP13 123 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 HAX1O00165 279 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 SMAD7O15105 426 aaKnown RBP13.17□□□□□ -0.3
CCDC197-202ENST00000444118 CAMPP49913 170 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 DMRTA1Q5VZB9 504 aa13.17□□□□□ -0.3
CCDC197-202ENST00000444118 PDZD2O15018 2839 aa13.16□□□□□ -0.3
CCDC197-202ENST00000444118 SH2D1AO60880 128 aa13.16□□□□□ -0.3
CCDC197-202ENST00000444118 BAGE3Q86Y29 109 aa13.16□□□□□ -0.3
CCDC197-202ENST00000444118 ZNF702PQ9H963 129 aa13.16□□□□□ -0.3
CCDC197-202ENST00000444118 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
CCDC197-202ENST00000444118 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
CCDC197-202ENST00000444118 A0A1W2PS18 150 aa13.15□□□□□ -0.3
CCDC197-202ENST00000444118 GPHB5Q86YW7 130 aa13.15□□□□□ -0.3
CCDC197-202ENST00000444118 NDFIP1Q9BT67 221 aa13.15□□□□□ -0.3
CCDC197-202ENST00000444118 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.3
CCDC197-202ENST00000444118 PPBPP02775 128 aa13.15□□□□□ -0.3
CCDC197-202ENST00000444118 PAFAH1B2P68402 229 aa13.15□□□□□ -0.3
CCDC197-202ENST00000444118 GATD1Q8NB37 220 aa13.15□□□□□ -0.3
CCDC197-202ENST00000444118 MYOZ3Q8TDC0 251 aa13.15□□□□□ -0.3
CCDC197-202ENST00000444118 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
CCDC197-202ENST00000444118 DAZ1Q9NQZ3 744 aaKnown RBP13.15□□□□□ -0.3
CCDC197-202ENST00000444118 A0A1B0GUT8 65 aa13.14□□□□□ -0.31
CCDC197-202ENST00000444118 SOCS3O14543 225 aa13.14□□□□□ -0.31
CCDC197-202ENST00000444118 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
CCDC197-202ENST00000444118 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
CCDC197-202ENST00000444118 C18orf32Q8TCD1 76 aa13.14□□□□□ -0.31
CCDC197-202ENST00000444118 IGHV7-4-1A0A0J9YVY3 117 aa13.13□□□□□ -0.31
CCDC197-202ENST00000444118 K7EMT4 169 aa13.13□□□□□ -0.31
CCDC197-202ENST00000444118 BMI1P35226 326 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms