RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 STOML3Q8TAV4 291 aa9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 ZNF471Q9BX82 626 aaPredicted RBP9.2□□□□□ -0.94
PDLIM2-212ENST00000443561 ZNF705GA8MUZ8 300 aaPredicted RBP9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 DIRC3C9JPN6 131 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 INSP01308 110 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 MBP02144 154 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 AMBPP02760 352 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 CRISP2P16562 243 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 CDKN1BP46527 198 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 TVP23CQ96ET8 276 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 ACTR3CQ9C0K3 210 aaPredicted RBP9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 OTORQ9NRC9 128 aa9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 YTHDF2Q9Y5A9 579 aaKnown RBP9.19□□□□□ -0.94
PDLIM2-212ENST00000443561 TRAV8-1A0A0A6YYK1 113 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 PGPA6NDG6 321 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 J3KRW8 73 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 BTN1A1Q13410 526 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 PMS2P11Q13670 270 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 AKR1C8PQ5T2L2 129 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 TMED6Q8WW62 240 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
PDLIM2-212ENST00000443561 KANTRA0A1W2PQU2 76 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 RBAKDNA6NC62 111 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 ZNF324O75467 553 aaPredicted RBP9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 CXorf1O96002 111 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 IGLV2-11P01706 119 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 NKX2-5P52952 324 aaPredicted RBP9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 C12orf74Q32Q52 190 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 ZNF767PQ75MW2 155 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
PDLIM2-212ENST00000443561 LOC102723971A0A1B0GUV8 181 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 SMIM9A6NGZ8 99 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 Q6ZTC4 211 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 HYLS1Q96M11 299 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 RPH3ALQ9UNE2 315 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 RYR2Q92736 4967 aa9.16□□□□□ -0.94
PDLIM2-212ENST00000443561 TRAV12-3A0A0B4J271 114 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 FAM74A7A6NL05 159 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 SLC25A5P05141 298 aaKnown RBP9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 LEPP41159 167 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 ZNF138P52744 262 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 GOLT1AQ6ZVE7 132 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 C11orf45Q8TAV5 145 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 PPP1R14DQ9NXH3 145 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 DKK2Q9UBU2 259 aa9.15□□□□□ -0.94
PDLIM2-212ENST00000443561 HYDINQ4G0P3 5121 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 C7orf71A4D174 169 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 PFDN1O60925 122 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 HBE1P02100 147 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 TCRAP04437 139 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 TPT1P13693 172 aaKnown RBP9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 TSPOP30536 169 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 EMP1P54849 157 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 UBE2G2P60604 165 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 ARL6IP6Q8N6S5 226 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 C5orf17Q8NAS9 161 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 FAM213BQ8TBF2 198 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 SGK494Q96LW2 274 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 TMEM167BQ9NRX6 74 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 BOLA1Q9Y3E2 137 aa9.14□□□□□ -0.95
PDLIM2-212ENST00000443561 A0A1W2PRE2 83 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 TAS2R60P59551 318 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 SUMO1P63165 101 aaKnown RBP9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 FAM74A1Q5RGS3 127 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 TMEM78Q5T7P6 136 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 CEMP1Q6PRD7 247 aaPredicted RBP9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 CCDC28AQ8IWP9 274 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 TMEM256Q8N2U0 113 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 C11orf72Q8NBR9 251 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 C20orf144Q9BQM9 153 aa9.13□□□□□ -0.95
PDLIM2-212ENST00000443561 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 A0A1B0GV50 99 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 H7BYZ3 331 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 NMBP08949 121 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 CSN1S1P47710 185 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 ATP5G3P48201 142 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 SULT1A2P50226 295 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 CCL20P78556 96 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 RXFP4Q8TDU9 374 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 LINC01587Q99440 93 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 TMEM208Q9BTX3 173 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 EPDR1Q9UM22 224 aa9.12□□□□□ -0.95
PDLIM2-212ENST00000443561 UMAD1C9J7I0 102 aa9.11□□□□□ -0.95
PDLIM2-212ENST00000443561 F6UZH7 168 aa9.11□□□□□ -0.95
PDLIM2-212ENST00000443561 RNASE4P34096 147 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms