RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ALKBH7Q9BT30 221 aaPredicted RBP17.81■□□□□ 0.44
CTDSPL-206ENST00000443503 SMPXQ9UHP9 88 aa17.81■□□□□ 0.44
CTDSPL-206ENST00000443503 SAP30O75446 220 aa17.81■□□□□ 0.44
CTDSPL-206ENST00000443503 RCHY1Q96PM5 261 aa17.81■□□□□ 0.44
CTDSPL-206ENST00000443503 PRR25Q96S07 402 aa17.81■□□□□ 0.44
CTDSPL-206ENST00000443503 ZNF491Q8N8L2 437 aa17.81■□□□□ 0.44
CTDSPL-206ENST00000443503 MPV17L2Q567V2 206 aa17.8■□□□□ 0.44
CTDSPL-206ENST00000443503 IGHV3-64A0A075B6Q5 118 aa17.8■□□□□ 0.44
CTDSPL-206ENST00000443503 TMEM14CQ9P0S9 112 aa17.8■□□□□ 0.44
CTDSPL-206ENST00000443503 C8orf31Q8N9H6 132 aa17.8■□□□□ 0.44
CTDSPL-206ENST00000443503 PRO3102Q9H379 93 aa17.8■□□□□ 0.44
CTDSPL-206ENST00000443503 A0A087WWL8 130 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 TRGV4A0A0C4DH28 118 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 ZC2HC1BQ5TFG8 222 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 NAA38Q9BRA0 125 aaKnown RBP17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 A0A087X0K7 114 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 A8MWP6 167 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 HSD52Q0P140 79 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 POLR3KQ9Y2Y1 108 aaPredicted RBP17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 RNASE1P07998 156 aaKnown RBP17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 GATA3P23771 443 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 PLXNB1O43157 2135 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 HIVEP3Q5T1R4 2406 aa17.79■□□□□ 0.44
CTDSPL-206ENST00000443503 LINC01559Q495D7 138 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 OR2K2Q8NGT1 345 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 CSTL1Q9H114 145 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 TNFRSF6BO95407 300 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 FAM120AOSQ5T036 256 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 C8orf86Q6ZUL3 223 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 OR9G4Q8NGQ1 327 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 K7EN84 100 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 FAM104BQ5XKR9 115 aa17.78■□□□□ 0.44
CTDSPL-206ENST00000443503 SEC11AP67812 179 aa17.77■□□□□ 0.44
CTDSPL-206ENST00000443503 C17orf77Q96MU5 243 aa17.77■□□□□ 0.44
CTDSPL-206ENST00000443503 DEFB131AP59861 70 aa17.77■□□□□ 0.43
CTDSPL-206ENST00000443503 HIVEP2P31629 2446 aa17.77■□□□□ 0.43
CTDSPL-206ENST00000443503 DNAL4O96015 105 aa17.76■□□□□ 0.43
CTDSPL-206ENST00000443503 IGLV2-14P01704 120 aa17.76■□□□□ 0.43
CTDSPL-206ENST00000443503 A0A0U1RRA0 63 aa17.76■□□□□ 0.43
CTDSPL-206ENST00000443503 SMIM27A0A1W2PRY6 76 aa17.76■□□□□ 0.43
CTDSPL-206ENST00000443503 ZC2HC1AQ96GY0 325 aa17.76■□□□□ 0.43
CTDSPL-206ENST00000443503 VCYO14598 125 aa17.76■□□□□ 0.43
CTDSPL-206ENST00000443503 UBE2E2Q96LR5 201 aa17.76■□□□□ 0.43
CTDSPL-206ENST00000443503 TRAV2A0A0B4J234 112 aa17.75■□□□□ 0.43
CTDSPL-206ENST00000443503 LINC01549A6NIU2 74 aa17.75■□□□□ 0.43
CTDSPL-206ENST00000443503 PCP4P48539 62 aa17.75■□□□□ 0.43
CTDSPL-206ENST00000443503 Q6ZWC4 215 aa17.75■□□□□ 0.43
CTDSPL-206ENST00000443503 Q5PR19 223 aa17.75■□□□□ 0.43
CTDSPL-206ENST00000443503 TRGV1A0A0A0MS02 117 aa17.75■□□□□ 0.43
CTDSPL-206ENST00000443503 BCL6BQ8N143 479 aaPredicted RBP17.75■□□□□ 0.43
CTDSPL-206ENST00000443503 NDUFS6O75380 124 aaKnown RBP17.74■□□□□ 0.43
CTDSPL-206ENST00000443503 CRIP3Q6Q6R5 217 aa17.74■□□□□ 0.43
CTDSPL-206ENST00000443503 Q6ZPA2 131 aa17.74■□□□□ 0.43
CTDSPL-206ENST00000443503 RITA1Q96K30 269 aa17.74■□□□□ 0.43
CTDSPL-206ENST00000443503 PRSS46E5RG02 174 aa17.74■□□□□ 0.43
CTDSPL-206ENST00000443503 C1orf122Q6ZSJ8 110 aa17.74■□□□□ 0.43
CTDSPL-206ENST00000443503 NAV3Q8IVL0 2385 aa17.74■□□□□ 0.43
CTDSPL-206ENST00000443503 STPG4Q8N801 248 aa17.73■□□□□ 0.43
CTDSPL-206ENST00000443503 VGLL1Q99990 258 aa17.73■□□□□ 0.43
CTDSPL-206ENST00000443503 EREGO14944 169 aa17.73■□□□□ 0.43
CTDSPL-206ENST00000443503 CHCHD5Q9BSY4 110 aa17.73■□□□□ 0.43
CTDSPL-206ENST00000443503 IGHV3-53P01767 116 aa17.72■□□□□ 0.43
CTDSPL-206ENST00000443503 PRSS57Q6UWY2 283 aa17.72■□□□□ 0.43
CTDSPL-206ENST00000443503 ZNF415Q09FC8 603 aa17.72■□□□□ 0.43
CTDSPL-206ENST00000443503 SPINK13Q1W4C9 94 aa17.72■□□□□ 0.43
CTDSPL-206ENST00000443503 MORN5Q5VZ52 161 aa17.72■□□□□ 0.43
CTDSPL-206ENST00000443503 SPOCK3Q9BQ16 436 aa17.72■□□□□ 0.43
CTDSPL-206ENST00000443503 HLA-DMBP28068 263 aa17.71■□□□□ 0.43
CTDSPL-206ENST00000443503 ZNF479Q96JC4 524 aa17.71■□□□□ 0.43
CTDSPL-206ENST00000443503 OR11H6Q8NGC7 330 aa17.71■□□□□ 0.43
CTDSPL-206ENST00000443503 C20orf144Q9BQM9 153 aa17.71■□□□□ 0.43
CTDSPL-206ENST00000443503 NDUFA4O00483 81 aa17.7■□□□□ 0.42
CTDSPL-206ENST00000443503 IGKV1-17P01599 117 aa17.7■□□□□ 0.42
CTDSPL-206ENST00000443503 RPL35AP18077 110 aaKnown RBP17.7■□□□□ 0.42
CTDSPL-206ENST00000443503 HOXA3O43365 443 aaPredicted RBP17.7■□□□□ 0.42
CTDSPL-206ENST00000443503 PLNP26678 52 aa17.7■□□□□ 0.42
CTDSPL-206ENST00000443503 MRPL51Q4U2R6 128 aaKnown RBP17.7■□□□□ 0.42
CTDSPL-206ENST00000443503 HOXB4P17483 251 aaPredicted RBP17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 MEGF9Q9H1U4 602 aa17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 RIPPLY3P57055 190 aa17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 MRPS16Q9Y3D3 137 aaKnown RBP17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 TLN2Q9Y4G6 2542 aa17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 NACAE9PAV3 2078 aa17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 CR1LQ2VPA4 569 aa17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 CHD3Q12873 2000 aaKnown RBP17.69■□□□□ 0.42
CTDSPL-206ENST00000443503 TDGF1P3P51864 188 aa17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 ANKRD11Q6UB99 2663 aaPredicted RBP17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 KNCNA6PVL3 124 aa17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 DLEU1O43261 78 aa17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 PATE2Q6UY27 113 aa17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 RPL36AP83881 106 aaKnown RBP17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 RPL36ALQ969Q0 106 aaKnown RBP17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 NCKAP5O14513 1909 aa17.68■□□□□ 0.42
CTDSPL-206ENST00000443503 UTRNP46939 3433 aa17.67■□□□□ 0.42
CTDSPL-206ENST00000443503 PROP1O75360 226 aa17.67■□□□□ 0.42
CTDSPL-206ENST00000443503 Q96MF0 132 aa17.67■□□□□ 0.42
CTDSPL-206ENST00000443503 CEP350Q5VT06 3117 aa17.67■□□□□ 0.42
CTDSPL-206ENST00000443503 SORL1Q92673 2214 aa17.67■□□□□ 0.42
CTDSPL-206ENST00000443503 IGKV1OR2-108A0A075B7D4 117 aa17.67■□□□□ 0.42
CTDSPL-206ENST00000443503 K7EIM0 57 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms