RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 FANCMQ8IYD8 2048 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 IGHV1-24A0A0C4DH33 117 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 hDV103S1A0JD37 113 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 OOSP1A8MZH6 123 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 GNRH2O43555 120 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 PITX3O75364 302 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 ATP11AUNQ6ZP68 121 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 OR2T35Q8NGX2 323 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 KLF14Q8TD94 323 aaPredicted RBP2.81□□□□□ -1.96
VPS50-206ENST00000443443 NABP2Q9BQ15 211 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 CST11Q9H112 138 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 ADGRL1O94910 1474 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 ERICH3Q5RHP9 1530 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 ARHGEF28Q8N1W1 1705 aaKnown RBP2.81□□□□□ -1.96
VPS50-206ENST00000443443 BRWD3Q6RI45 1802 aa2.81□□□□□ -1.96
VPS50-206ENST00000443443 FRMPD1Q5SYB0 1578 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 ZNF705FA8MVS1 300 aaPredicted RBP2.8□□□□□ -1.96
VPS50-206ENST00000443443 J3QLW9 94 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 M0R233 179 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 EDF1O60869 148 aaKnown RBP2.8□□□□□ -1.96
VPS50-206ENST00000443443 SNCGO76070 127 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 GYPBP06028 91 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 DEFA4P12838 97 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 C6orf52Q5T4I8 152 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 ATP6V0E2Q8NHE4 81 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 SPTSSAQ969W0 71 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 HHLA3Q9XRX5 114 aa2.8□□□□□ -1.96
VPS50-206ENST00000443443 NUP98P52948 1817 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 QRICH2Q9H0J4 1663 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 LTBP4Q8N2S1 1624 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 ADGRB1O14514 1584 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 TEX14Q8IWB6 1497 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 RRBP1Q9P2E9 1410 aaKnown RBP2.79□□□□□ -1.96
VPS50-206ENST00000443443 IGLV3-16A0A075B6K0 115 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 WISP3O95389 354 aaPredicted RBP2.79□□□□□ -1.96
VPS50-206ENST00000443443 IL5P05113 134 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 ZNF22P17026 224 aaPredicted RBP2.79□□□□□ -1.96
VPS50-206ENST00000443443 C12orf73Q69YU5 71 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 Q6ZS92 163 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 LINC00301Q8NCQ3 95 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 VSTM2AQ8TAG5 236 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 LSM10Q969L4 123 aaKnown RBP2.79□□□□□ -1.96
VPS50-206ENST00000443443 C14orf132Q9NPU4 83 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 TMEM106BQ9NUM4 274 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 ATG2AQ2TAZ0 1938 aa2.79□□□□□ -1.96
VPS50-206ENST00000443443 GLI3P10071 1580 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 MYH7BA7E2Y1 1941 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 ANKRD36BQ8N2N9 1353 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 TRAV3A0A0B4J244 114 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 IGHV1-18A0A0C4DH31 117 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 C16orf90A8MZG2 172 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 MGST1P10620 155 aaKnown RBP2.78□□□□□ -1.96
VPS50-206ENST00000443443 PIPP12273 146 aaPredicted RBP2.78□□□□□ -1.96
VPS50-206ENST00000443443 ZNF14P17017 642 aaPredicted RBP2.78□□□□□ -1.96
VPS50-206ENST00000443443 SPANXN5Q5MJ07 72 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 Q6ZQT0 140 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 Q8IYB0 196 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 Q8NAQ8 132 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 Q96M85 177 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 OR8B2Q96RD0 313 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 SMIM7Q9BQ49 75 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 SLC50A1Q9BRV3 221 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 ATG5Q9H1Y0 275 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 TMEM242Q9NWH2 141 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 BET1LQ9NYM9 111 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 MINOS1-NBL1R4GNA1 71 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 KIAA1551Q9HCM1 1747 aa2.78□□□□□ -1.96
VPS50-206ENST00000443443 ZNF638Q14966 1978 aaKnown RBP2.78□□□□□ -1.97
VPS50-206ENST00000443443 BCORL1Q5H9F3 1711 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 IGKV2D-26A0A0A0MRZ7 120 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 PIGBOS1A0A0B4J2F0 54 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 LOC107984156A0A0G2JMH3 177 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 A0A1B0GU33 70 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 A6NN06 94 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 PROSCO94903 275 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 NDUFB6O95139 128 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 CRPP02741 224 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 CLPSP04118 112 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 IGLC1P0CG04 106 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 NNATQ16517 81 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 ARL17AQ8IVW1 177 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 Q8N814 137 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 TSKUQ8WUA8 353 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 NCKAP5O14513 1909 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 SVILO95425 2214 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 FYCO1Q9BQS8 1478 aa2.77□□□□□ -1.97
VPS50-206ENST00000443443 EML6Q6ZMW3 1958 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 COLCA2A8K830 154 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 G3V3Q6 166 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 IL7P13232 177 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 ROMO1P60602 79 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 DCDP81605 110 aaKnown RBP2.76□□□□□ -1.97
VPS50-206ENST00000443443 HMGN2P46Q86SG4 172 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 LYPD6Q86Y78 171 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 C10orf105Q8TEF2 133 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 MUCL1Q96DR8 90 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 CXCL16Q9H2A7 254 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 ANKRD26Q9UPS8 1709 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 RTEL1-TNFRSF6BF6WH68 1400 aa2.76□□□□□ -1.97
VPS50-206ENST00000443443 IGHV3-64A0A075B6Q5 118 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms