RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 PROP1O75360 226 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 CT62P0C5K7 136 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 KLHL30-AS1Q8NEE0 82 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 FDCSPQ8NFU4 85 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 ODF3Q96PU9 254 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 LRRC37A3O60309 1634 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 IGKV2D-26A0A0A0MRZ7 120 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 ADM5C9JUS6 153 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 CXCL6P80162 114 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 ESRGQ1W209 222 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 Q6JHZ5 121 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 MRPL14Q6P1L8 145 aaKnown RBP4.41□□□□□ -1.7
PTPRC-209ENST00000442510 Q6P435 159 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 Q6ZR03 302 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 DAND5Q8N907 189 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 CCDC140Q96MF4 163 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 LTN1O94822 1766 aa4.4□□□□□ -1.7
PTPRC-209ENST00000442510 CD28P10747 220 aa4.4□□□□□ -1.7
PTPRC-209ENST00000442510 Q86TA4 180 aa4.4□□□□□ -1.7
PTPRC-209ENST00000442510 FANCMQ8IYD8 2048 aa4.4□□□□□ -1.7
PTPRC-209ENST00000442510 IGHV3-21A0A0B4J1V1 117 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 C15orf65H3BRN8 121 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 HOXB4P17483 251 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-209ENST00000442510 LOXP28300 417 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-209ENST00000442510 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 MIFP14174 115 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 SS18Q15532 418 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 FAM74A4Q5TZK3 123 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 ZNF576Q9H609 170 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 INTS1Q8N201 2190 aaKnown RBP4.4□□□□□ -1.71
PTPRC-209ENST00000442510 MYLKQ15746 1914 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 TRBV30A0A0K0K1B3 111 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 TMEM223A0PJW6 202 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 LINC01619G3V211 115 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 CEMP1Q6PRD7 247 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-209ENST00000442510 CXCL17Q6UXB2 119 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 TMEM141Q96I45 108 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 ORMDL1Q9P0S3 153 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 NDUFA12Q9UI09 145 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 SIT1Q9Y3P8 196 aa4.4□□□□□ -1.71
PTPRC-209ENST00000442510 RGPD8O14715 1765 aaPredicted RBP4.39□□□□□ -1.71
PTPRC-209ENST00000442510 RGPD5Q99666 1765 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 IGKV6D-21A0A0A0MT36 114 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 IGKV3D-20A0A0C4DH25 116 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 UBE2D3P61077 147 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 UBE2D2P62837 147 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 ENHOQ6UWT2 76 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 C5P01031 1676 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 C5orf63A6NC05 138 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 IGHV3-48P01763 117 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 IGHV3-33P01772 117 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 FGFBP3Q8TAT2 258 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 MBD6Q96DN6 1003 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 NRXN3Q9Y4C0 1643 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 KIAA1551Q9HCM1 1747 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 RPL27AP46776 148 aaKnown RBP4.39□□□□□ -1.71
PTPRC-209ENST00000442510 RSPO1Q2MKA7 263 aaPredicted RBP4.39□□□□□ -1.71
PTPRC-209ENST00000442510 C14orf132Q9NPU4 83 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 NCOR1O75376 2440 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 LRRK1Q38SD2 2015 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 IGKV1-9A0A0C4DH69 117 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 COX7A2LO14548 114 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 CRIPAKQ8N1N5 446 aa4.39□□□□□ -1.71
PTPRC-209ENST00000442510 PRR14LQ5THK1 2151 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 ZNF106Q9H2Y7 1883 aaKnown RBP4.38□□□□□ -1.71
PTPRC-209ENST00000442510 SCRG1O75711 98 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 CISD3P0C7P0 127 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 HOXD3P31249 432 aaPredicted RBP4.38□□□□□ -1.71
PTPRC-209ENST00000442510 FAM120AOSQ5T036 256 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 IGHV3-9P01782 118 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 MP68P56378 58 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 MAPKAPK5-AS1Q8N8E1 139 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 TOMM7Q9P0U1 55 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 NCKAP5O14513 1909 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 C3P01024 1663 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 RPS21P63220 83 aaKnown RBP4.38□□□□□ -1.71
PTPRC-209ENST00000442510 NACAE9PAV3 2078 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 HCP5Q6MZN7 132 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 TRIP12Q14669 1992 aaPredicted RBP4.38□□□□□ -1.71
PTPRC-209ENST00000442510 DSCAML1Q8TD84 2053 aa4.38□□□□□ -1.71
PTPRC-209ENST00000442510 TRIAP1O43715 76 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 CCKP06307 115 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 SMIM2Q9BVW6 85 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 ARHGAP21Q5T5U3 1957 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 FREM3P0C091 2139 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 PRRC2BQ5JSZ5 2229 aaKnown RBP4.37□□□□□ -1.71
PTPRC-209ENST00000442510 A0A096LPE4 126 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 A0A1B0GXF2 115 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 A0A1W2PPZ6 126 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 H0YGX0 51 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 ZNF73O43830 326 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-209ENST00000442510 SMCPP49901 116 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-209ENST00000442510 LINC00158P58513 81 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 SPRNQ5BIV9 151 aa4.37□□□□□ -1.71
PTPRC-209ENST00000442510 RNASE13Q5GAN3 156 aaKnown RBP4.37□□□□□ -1.71
PTPRC-209ENST00000442510 LY6G5CQ5SRR4 150 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms