RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SMIM15Q7Z3B0 74 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 RNF182Q8N6D2 247 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 VGLL1Q99990 258 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 CSPG4Q6UVK1 2322 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 BSNQ9UPA5 3926 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 HRNRQ86YZ3 2850 aaPredicted RBP4.59□□□□□ -1.67
VPS50-205ENST00000441602 TRAV8-2A0A0B4J237 113 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 ZNF705FA8MVS1 300 aaPredicted RBP4.59□□□□□ -1.67
VPS50-205ENST00000441602 CA1P00915 261 aaPredicted RBP4.59□□□□□ -1.67
VPS50-205ENST00000441602 TSPOP30536 169 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 LEPP41159 167 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 COA6Q5JTJ3 125 aaKnown RBP4.59□□□□□ -1.67
VPS50-205ENST00000441602 TMEM136Q6ZRR5 245 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 AGPAT4-IT1Q9H0P7 198 aa4.59□□□□□ -1.67
VPS50-205ENST00000441602 UBR5O95071 2799 aaPredicted RBP4.59□□□□□ -1.67
VPS50-205ENST00000441602 TRAV2A0A0B4J234 112 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 TRAV21A0A0B4J279 112 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 SMIM6P0DI80 62 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 CAMPP49913 170 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 WFDC3Q8IUB2 231 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 OR8A1Q8NGG7 326 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 Q8TAT8 98 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 C8orf49Q96NF6 230 aa4.59□□□□□ -1.68
VPS50-205ENST00000441602 IGKV3-7A0A075B6H7 116 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 TMEM213A2RRL7 107 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 C2orf70A6NJV1 201 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 F2Z2F3 143 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 FOXA3P55318 350 aaPredicted RBP4.58□□□□□ -1.68
VPS50-205ENST00000441602 ERCC8Q13216 396 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 C10orf99Q6UWK7 81 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 FER1L6-AS1Q8NA97 138 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 TPPP3Q9BW30 176 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 TSSC4Q9Y5U2 329 aaPredicted RBP4.58□□□□□ -1.68
VPS50-205ENST00000441602 KLF5Q13887 457 aaPredicted RBP4.58□□□□□ -1.68
VPS50-205ENST00000441602 OR10J3Q5JRS4 329 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 A0A1B0GUS0 222 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 PRAC2D3DTV9 90 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 LY6G6DO95868 133 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 CMC4P56277 68 aaPredicted RBP4.58□□□□□ -1.68
VPS50-205ENST00000441602 Q0VG73 95 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 LINC01559Q495D7 138 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 TCTEX1D4Q5JR98 221 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 OR11H1Q8NG94 326 aa4.58□□□□□ -1.68
VPS50-205ENST00000441602 TMSB15BA0A087X1C1 80 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 TRAV25A0A0B4J276 109 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 OR4C46A6NHA9 309 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 SOCS3O14543 225 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 TCF21O43680 179 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 GPX1P07203 203 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 CACNG7P62955 275 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 LINC00322Q6ZN03 302 aaPredicted RBP4.57□□□□□ -1.68
VPS50-205ENST00000441602 HIST3H2BBQ8N257 126 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 ODF3Q96PU9 254 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 PHOX2AO14813 284 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 TFPI2P48307 235 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 OR9G4Q8NGQ1 327 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 SAMD10Q9BYL1 202 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 MS4A6AQ9H2W1 248 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 ZZEF1O43149 2961 aa4.57□□□□□ -1.68
VPS50-205ENST00000441602 K7EQG2 157 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 SRIP30626 198 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 SLURP1P55000 103 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 PSMG4Q5JS54 123 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 FABP4P15090 132 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 S100A4P26447 101 aaKnown RBP4.56□□□□□ -1.68
VPS50-205ENST00000441602 OR10D4PQ8NGN7 298 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 KCNS1Q96KK3 526 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 GPR61Q9BZJ8 451 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 ZNF688P0C7X2 276 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 GZMBP10144 247 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 CTRLP40313 264 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 ASIPP42127 132 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 CRIP1P50238 77 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 PDZD11Q5EBL8 140 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 DMRTA1Q5VZB9 504 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 LYZL1Q6UWQ5 148 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 FOXI2Q6ZQN5 318 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 GTSF1Q8WW33 167 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 C20orf173Q96LM9 149 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 ESM1Q9NQ30 184 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 RNF114Q9Y508 228 aa4.56□□□□□ -1.68
VPS50-205ENST00000441602 KMT2BQ9UMN6 2715 aaPredicted RBP4.56□□□□□ -1.68
VPS50-205ENST00000441602 CCL24O00175 119 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 RAB4AP20338 218 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 ADGRG4Q8IZF6 3080 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 LINC00518Q8N0U6 118 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 LINC01006Q8NI28 216 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 PACRGQ96M98 296 aaPredicted RBP4.55□□□□□ -1.68
VPS50-205ENST00000441602 FLNCQ14315 2725 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 ASPMQ8IZT6 3477 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 ARMS2P0C7Q2 107 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 MED14OSP0DP75 135 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 PMCHP20382 165 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 KIAA1644Q3SXP7 199 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 DCANP1Q8TF63 244 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 C12orf57Q99622 126 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 SPAG8Q99932 426 aaPredicted RBP4.55□□□□□ -1.68
VPS50-205ENST00000441602 NAGKQ9UJ70 344 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms