RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 RXFP4Q8TDU9 374 aa13.05□□□□□ -0.32
SMPD4-210ENST00000441135 FAM19A4Q96LR4 140 aa13.05□□□□□ -0.32
SMPD4-210ENST00000441135 ARPC5LQ9BPX5 153 aa13.05□□□□□ -0.32
SMPD4-210ENST00000441135 ACTR3CQ9C0K3 210 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-210ENST00000441135 OTORQ9NRC9 128 aa13.05□□□□□ -0.32
SMPD4-210ENST00000441135 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 LOC102723971A0A1B0GUV8 181 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 ARL14EPLP0DKL9 152 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 TAS2R60P59551 318 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 RANP62826 216 aaKnown RBP13.04□□□□□ -0.32
SMPD4-210ENST00000441135 FAM74A1Q5RGS3 127 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 TCTE3Q8IZS6 198 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 ST6GAL2Q96JF0 529 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 CELA1Q9UNI1 258 aa13.04□□□□□ -0.32
SMPD4-210ENST00000441135 H7BYZ3 331 aa13.03□□□□□ -0.32
SMPD4-210ENST00000441135 SPART-AS1P0CW21 52 aa13.03□□□□□ -0.32
SMPD4-210ENST00000441135 CRISP2P16562 243 aa13.03□□□□□ -0.32
SMPD4-210ENST00000441135 AGPAT4-IT1Q9H0P7 198 aa13.03□□□□□ -0.32
SMPD4-210ENST00000441135 APLNQ9ULZ1 77 aa13.03□□□□□ -0.32
SMPD4-210ENST00000441135 BIRC6Q9NR09 4857 aa13.03□□□□□ -0.32
SMPD4-210ENST00000441135 CTXND1A0A1B0GTU2 59 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 KLLNB2CW77 178 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 CXorf1O96002 111 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 PRB4P10163 310 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-210ENST00000441135 C12orf74Q32Q52 190 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 AKR1C8PQ5T2L2 129 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 TMEM78Q5T7P6 136 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 GFI1BQ5VTD9 330 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 TMEM167BQ9NRX6 74 aa13.02□□□□□ -0.33
SMPD4-210ENST00000441135 IGKV2-40A0A087WW87 121 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-210ENST00000441135 BCL2L11O43521 198 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 IGKV2D-40P01614 121 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-210ENST00000441135 GCHFRP30047 84 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 EIF5AP63241 154 aaKnown RBP13.01□□□□□ -0.33
SMPD4-210ENST00000441135 ERCC8Q13216 396 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 LINC01587Q99440 93 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF492Q9P255 531 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 DKK2Q9UBU2 259 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 LENEPQ9Y5L5 61 aa13.01□□□□□ -0.33
SMPD4-210ENST00000441135 IGHV4-4A0A075B6R2 117 aa13□□□□□ -0.33
SMPD4-210ENST00000441135 DEFB131BA0A096LNP1 70 aa13□□□□□ -0.33
SMPD4-210ENST00000441135 KANTRA0A1W2PQU2 76 aa13□□□□□ -0.33
SMPD4-210ENST00000441135 DIRC3C9JPN6 131 aa13□□□□□ -0.33
SMPD4-210ENST00000441135 HMGB3O15347 200 aaKnown RBP13□□□□□ -0.33
SMPD4-210ENST00000441135 EIF3GO75821 320 aaKnown RBP eCLIP13□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF138P52744 262 aa13□□□□□ -0.33
SMPD4-210ENST00000441135 CMTM2Q8TAZ6 248 aa13□□□□□ -0.33
SMPD4-210ENST00000441135 VGLL1Q99990 258 aa13□□□□□ -0.33
SMPD4-210ENST00000441135 YTHDF2Q9Y5A9 579 aaKnown RBP13□□□□□ -0.33
SMPD4-210ENST00000441135 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 PGPA6NDG6 321 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 LYRM9A8MSI8 78 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF705GA8MUZ8 300 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-210ENST00000441135 SEC11BP0C7V7 166 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 EMP1P54849 157 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 KIR3DS1Q14943 382 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF767PQ75MW2 155 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 C16orf74Q96GX8 76 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 PYGO2Q9BRQ0 406 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 NIPSNAP3BQ9BS92 247 aa12.99□□□□□ -0.33
SMPD4-210ENST00000441135 C7orf71A4D174 169 aa12.98□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF726P1Q15940 193 aa12.98□□□□□ -0.33
SMPD4-210ENST00000441135 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
SMPD4-210ENST00000441135 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
SMPD4-210ENST00000441135 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
SMPD4-210ENST00000441135 PLAC8L1A1L4L8 177 aa12.97□□□□□ -0.33
SMPD4-210ENST00000441135 UMAD1C9J7I0 102 aa12.97□□□□□ -0.33
SMPD4-210ENST00000441135 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
SMPD4-210ENST00000441135 C5orf17Q8NAS9 161 aa12.97□□□□□ -0.33
SMPD4-210ENST00000441135 RNASE8Q8TDE3 154 aaKnown RBP12.97□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF471Q9BX82 626 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-210ENST00000441135 A0A1W2PRE2 83 aa12.96□□□□□ -0.33
SMPD4-210ENST00000441135 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-210ENST00000441135 C1QBP02746 253 aa12.96□□□□□ -0.33
SMPD4-210ENST00000441135 TMUB2Q71RG4 321 aa12.96□□□□□ -0.33
SMPD4-210ENST00000441135 STOML3Q8TAV4 291 aa12.96□□□□□ -0.33
SMPD4-210ENST00000441135 NDUFAF3Q9BU61 184 aa12.96□□□□□ -0.33
SMPD4-210ENST00000441135 TRAV12-3A0A0B4J271 114 aa12.95□□□□□ -0.34
SMPD4-210ENST00000441135 PFDN1O60925 122 aa12.95□□□□□ -0.34
SMPD4-210ENST00000441135 GPX1P07203 203 aa12.95□□□□□ -0.34
SMPD4-210ENST00000441135 AZU1P20160 251 aa12.95□□□□□ -0.34
SMPD4-210ENST00000441135 DPPA3Q6W0C5 159 aa12.95□□□□□ -0.34
SMPD4-210ENST00000441135 CCDC28AQ8IWP9 274 aa12.95□□□□□ -0.34
SMPD4-210ENST00000441135 HYLS1Q96M11 299 aa12.95□□□□□ -0.34
SMPD4-210ENST00000441135 TPT1P13693 172 aaKnown RBP12.94□□□□□ -0.34
SMPD4-210ENST00000441135 AKAP14Q86UN6 197 aa12.94□□□□□ -0.34
SMPD4-210ENST00000441135 FAM210BQ96KR6 192 aa12.94□□□□□ -0.34
SMPD4-210ENST00000441135 NKX6-2Q9C056 277 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-210ENST00000441135 TIMM8BQ9Y5J9 83 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-210ENST00000441135 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 FBLL1A6NHQ2 334 aaKnown RBP12.93□□□□□ -0.34
SMPD4-210ENST00000441135 GGTLC3B5MD39 225 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 J3KRW8 73 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 CD300CQ08708 224 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 BTN1A1Q13410 526 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 ANXA2RQ3ZCQ2 193 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 GOLT1AQ6ZVE7 132 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms