RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 M0R3E3 92 aa13.87□□□□□ -0.19
TRIM39-210ENST00000440271 TSC22D2O75157 780 aa13.87□□□□□ -0.19
TRIM39-210ENST00000440271 MRPL53Q96EL3 112 aaKnown RBP13.87□□□□□ -0.19
TRIM39-210ENST00000440271 LINC00477Q96M19 166 aa13.87□□□□□ -0.19
TRIM39-210ENST00000440271 GGACTQ9BVM4 153 aa13.87□□□□□ -0.19
TRIM39-210ENST00000440271 SLIRPQ9GZT3 109 aaKnown RBP13.87□□□□□ -0.19
TRIM39-210ENST00000440271 AGPAT4-IT1Q9H0P7 198 aa13.87□□□□□ -0.19
TRIM39-210ENST00000440271 E5RGE8 158 aa13.86□□□□□ -0.19
TRIM39-210ENST00000440271 K7EQD1 137 aa13.86□□□□□ -0.19
TRIM39-210ENST00000440271 ZNF253O75346 499 aa13.86□□□□□ -0.19
TRIM39-210ENST00000440271 GPX1P07203 203 aa13.86□□□□□ -0.19
TRIM39-210ENST00000440271 SRIP30626 198 aa13.86□□□□□ -0.19
TRIM39-210ENST00000440271 TAS2R30P59541 319 aa13.86□□□□□ -0.19
TRIM39-210ENST00000440271 UBE2MP61081 183 aaKnown RBP13.86□□□□□ -0.19
TRIM39-210ENST00000440271 PYDC2Q56P42 97 aa13.86□□□□□ -0.19
TRIM39-210ENST00000440271 NTN5Q8WTR8 489 aaPredicted RBP13.86□□□□□ -0.19
TRIM39-210ENST00000440271 LRCOL1A6NCL2 159 aa13.85□□□□□ -0.19
TRIM39-210ENST00000440271 KRTAP29-1A8MX34 341 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-210ENST00000440271 RGS13O14921 159 aa13.85□□□□□ -0.19
TRIM39-210ENST00000440271 SCGB1D2O95969 90 aa13.85□□□□□ -0.19
TRIM39-210ENST00000440271 Q6ZRG5 221 aa13.85□□□□□ -0.19
TRIM39-210ENST00000440271 RAB2BQ8WUD1 216 aa13.85□□□□□ -0.19
TRIM39-210ENST00000440271 FAM30AQ9NZY2 134 aa13.85□□□□□ -0.19
TRIM39-210ENST00000440271 TRGV4A0A0C4DH28 118 aa13.84□□□□□ -0.19
TRIM39-210ENST00000440271 CRYGDP07320 174 aa13.84□□□□□ -0.19
TRIM39-210ENST00000440271 CRISP2P16562 243 aa13.84□□□□□ -0.19
TRIM39-210ENST00000440271 CAMLGP49069 296 aa13.84□□□□□ -0.19
TRIM39-210ENST00000440271 Q6ZQT7 251 aa13.84□□□□□ -0.19
TRIM39-210ENST00000440271 DEDD2Q8WXF8 326 aa13.84□□□□□ -0.19
TRIM39-210ENST00000440271 TRBV19A0A075B6N1 114 aa13.83□□□□□ -0.2
TRIM39-210ENST00000440271 IGHV1OR15-1A0A075B7D0 117 aa13.83□□□□□ -0.2
TRIM39-210ENST00000440271 PSCAO43653 123 aa13.83□□□□□ -0.2
TRIM39-210ENST00000440271 MIC13Q5XKP0 118 aa13.83□□□□□ -0.2
TRIM39-210ENST00000440271 C10orf126Q8N4M7 172 aa13.83□□□□□ -0.2
TRIM39-210ENST00000440271 MRPS26Q9BYN8 205 aaKnown RBP13.83□□□□□ -0.2
TRIM39-210ENST00000440271 RCL1Q9Y2P8 373 aaKnown RBP13.83□□□□□ -0.2
TRIM39-210ENST00000440271 NDUFB4O95168 129 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 NMBP08949 121 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 RAB31Q13636 194 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 IAH1Q2TAA2 248 aaPredicted RBP13.82□□□□□ -0.2
TRIM39-210ENST00000440271 PRR9Q5T870 116 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 NRARPQ7Z6K4 114 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 IQCF2Q8IXL9 164 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 ZFAND2AQ8N6M9 145 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 OR1L4Q8NGR5 311 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 PCNPQ8WW12 178 aaKnown RBP13.82□□□□□ -0.2
TRIM39-210ENST00000440271 ARPC5LQ9BPX5 153 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 PRELID1Q9Y255 219 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 DNAH8Q96JB1 4490 aa13.82□□□□□ -0.2
TRIM39-210ENST00000440271 C7orf66A4D0T2 115 aa13.81□□□□□ -0.2
TRIM39-210ENST00000440271 PLA2G1BP04054 148 aaKnown RBP13.81□□□□□ -0.2
TRIM39-210ENST00000440271 SFTA3P0C7M3 94 aa13.81□□□□□ -0.2
TRIM39-210ENST00000440271 GYPEP15421 78 aa13.81□□□□□ -0.2
TRIM39-210ENST00000440271 TMBIM6P55061 237 aa13.81□□□□□ -0.2
TRIM39-210ENST00000440271 C9orf47Q6ZRZ4 202 aa13.81□□□□□ -0.2
TRIM39-210ENST00000440271 BCL7BQ9BQE9 202 aa13.81□□□□□ -0.2
TRIM39-210ENST00000440271 GSKIPQ9P0R6 139 aa13.81□□□□□ -0.2
TRIM39-210ENST00000440271 ZNF415Q09FC8 603 aa13.8□□□□□ -0.2
TRIM39-210ENST00000440271 Q8N814 137 aa13.8□□□□□ -0.2
TRIM39-210ENST00000440271 ZNF479Q96JC4 524 aa13.8□□□□□ -0.2
TRIM39-210ENST00000440271 PFDN5Q99471 154 aa13.8□□□□□ -0.2
TRIM39-210ENST00000440271 TIMM9Q9Y5J7 89 aa13.8□□□□□ -0.2
TRIM39-210ENST00000440271 V9GYH0 126 aa13.8□□□□□ -0.2
TRIM39-210ENST00000440271 HMCN2Q8NDA2 5059 aa13.79□□□□□ -0.2
TRIM39-210ENST00000440271 ORM1P02763 201 aa13.79□□□□□ -0.2
TRIM39-210ENST00000440271 EXOC3-AS1Q8N2X6 119 aa13.79□□□□□ -0.2
TRIM39-210ENST00000440271 C12orf45Q8N5I9 185 aaPredicted RBP13.79□□□□□ -0.2
TRIM39-210ENST00000440271 TMEM14CQ9P0S9 112 aa13.79□□□□□ -0.2
TRIM39-210ENST00000440271 FLVCR2Q9UPI3 526 aa13.79□□□□□ -0.2
TRIM39-210ENST00000440271 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-210ENST00000440271 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-210ENST00000440271 MBPP02686 304 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-210ENST00000440271 C1QBP02746 253 aa13.78□□□□□ -0.2
TRIM39-210ENST00000440271 HIST1H1EP10412 219 aaKnown RBP13.78□□□□□ -0.2
TRIM39-210ENST00000440271 TMEM78Q5T7P6 136 aa13.78□□□□□ -0.2
TRIM39-210ENST00000440271 SERTAD4-AS1Q5TG53 156 aa13.78□□□□□ -0.2
TRIM39-210ENST00000440271 TXNDC17Q9BRA2 123 aa13.78□□□□□ -0.2
TRIM39-210ENST00000440271 SRRQ9GZT4 340 aa13.78□□□□□ -0.2
TRIM39-210ENST00000440271 UBR4Q5T4S7 5183 aa13.78□□□□□ -0.2
TRIM39-210ENST00000440271 NDUFB6O95139 128 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 PDE6HQ13956 83 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 OR10G4Q8NGN3 311 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 DEFB104AQ8WTQ1 72 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 BLNKQ8WV28 456 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 ZNF492Q9P255 531 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 WDR83OSQ9Y284 106 aa13.77□□□□□ -0.21
TRIM39-210ENST00000440271 PYYP10082 97 aa13.76□□□□□ -0.21
TRIM39-210ENST00000440271 RPL29P47914 159 aaKnown RBP13.76□□□□□ -0.21
TRIM39-210ENST00000440271 RASL10AQ92737 203 aa13.76□□□□□ -0.21
TRIM39-210ENST00000440271 AAMDCQ9H7C9 122 aa13.76□□□□□ -0.21
TRIM39-210ENST00000440271 IGHV3-38A0A0C4DH36 116 aa13.75□□□□□ -0.21
TRIM39-210ENST00000440271 IBA57-AS1B1ANH7 110 aa13.75□□□□□ -0.21
TRIM39-210ENST00000440271 C9JCJ5 164 aa13.75□□□□□ -0.21
TRIM39-210ENST00000440271 L7N2F9 121 aa13.75□□□□□ -0.21
TRIM39-210ENST00000440271 VAMP2P63027 116 aa13.75□□□□□ -0.21
TRIM39-210ENST00000440271 LINC00528Q8N1L1 170 aa13.75□□□□□ -0.21
TRIM39-210ENST00000440271 H3BMQ9 156 aa13.74□□□□□ -0.21
TRIM39-210ENST00000440271 CST7O76096 145 aa13.74□□□□□ -0.21
TRIM39-210ENST00000440271 BCAP31P51572 246 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms