RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 INAFM1C9JVW0 142 aa11.5□□□□□ -0.57
CPSF7-205ENST00000439958 S100A2P29034 98 aa11.5□□□□□ -0.57
CPSF7-205ENST00000439958 TMEM183AQ8IXX5 376 aa11.5□□□□□ -0.57
CPSF7-205ENST00000439958 SSBP4Q9BWG4 385 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-205ENST00000439958 IGLV2-11P01706 119 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 ELANEP08246 267 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 FOLR2P14207 255 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 KLF12Q9Y4X4 402 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 IGHV7-4-1A0A0J9YVY3 117 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 FOXL1Q12952 345 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 FOXE3Q13461 319 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 A0A1B0GUS0 222 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 S100A9P06702 114 aaKnown RBP11.49□□□□□ -0.57
CPSF7-205ENST00000439958 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
CPSF7-205ENST00000439958 NDUFS6O75380 124 aaKnown RBP11.48□□□□□ -0.57
CPSF7-205ENST00000439958 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
CPSF7-205ENST00000439958 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
CPSF7-205ENST00000439958 C1orf194Q5T5A4 169 aa11.48□□□□□ -0.57
CPSF7-205ENST00000439958 MRPL18Q9H0U6 180 aaKnown RBP11.48□□□□□ -0.57
CPSF7-205ENST00000439958 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
CPSF7-205ENST00000439958 A8MWL6 223 aa11.48□□□□□ -0.57
CPSF7-205ENST00000439958 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
CPSF7-205ENST00000439958 PRDM13Q9H4Q3 707 aa11.48□□□□□ -0.57
CPSF7-205ENST00000439958 UFC1Q9Y3C8 167 aa11.48□□□□□ -0.57
CPSF7-205ENST00000439958 M0QZ24 198 aa11.47□□□□□ -0.57
CPSF7-205ENST00000439958 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
CPSF7-205ENST00000439958 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
CPSF7-205ENST00000439958 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
CPSF7-205ENST00000439958 PPP1R14DQ9NXH3 145 aa11.47□□□□□ -0.57
CPSF7-205ENST00000439958 AGRNO00468 2067 aa11.47□□□□□ -0.57
CPSF7-205ENST00000439958 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.57
CPSF7-205ENST00000439958 PRR25Q96S07 402 aa11.46□□□□□ -0.57
CPSF7-205ENST00000439958 MLST8Q9BVC4 326 aa11.46□□□□□ -0.57
CPSF7-205ENST00000439958 PCP4L1A6NKN8 68 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 PSMG4Q5JS54 123 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 C20orf173Q96LM9 149 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 NSUN5P1Q3KNT7 163 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 SMUG1Q53HV7 270 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 OR10J6PQ8NGY7 276 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 TSKUQ8WUA8 353 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 AGPAT4-IT1Q9H0P7 198 aa11.46□□□□□ -0.58
CPSF7-205ENST00000439958 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
CPSF7-205ENST00000439958 SH2D1AO60880 128 aa11.45□□□□□ -0.58
CPSF7-205ENST00000439958 SCGB2A2Q13296 93 aa11.45□□□□□ -0.58
CPSF7-205ENST00000439958 CD28P10747 220 aa11.45□□□□□ -0.58
CPSF7-205ENST00000439958 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
CPSF7-205ENST00000439958 TMEM213A2RRL7 107 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 FABP4P15090 132 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 TCTEX1D4Q5JR98 221 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 OR1N2Q8NGR9 330 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 SERTM2A0A1B0GWG4 89 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 ZNF80P51504 273 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-205ENST00000439958 CITED2Q99967 270 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-205ENST00000439958 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
CPSF7-205ENST00000439958 IZUMO1RA6ND01 250 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 CRIP1P50238 77 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 Q6ZQT7 251 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 GPHB5Q86YW7 130 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 WIPF2Q8TF74 440 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-205ENST00000439958 GTSF1Q8WW33 167 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 KLK9Q9UKQ9 250 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 U3KQE9 123 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 SMIM27A0A1W2PRY6 76 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 BMI1P35226 326 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-205ENST00000439958 BORCS7Q96B45 105 aa11.43□□□□□ -0.58
CPSF7-205ENST00000439958 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
CPSF7-205ENST00000439958 C5orf52A6NGY3 159 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 LINC01619G3V211 115 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 FAM231DQ6ZW35 169 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 ATP6V0BQ99437 205 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 HTN1P15515 57 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 CRISP2P16562 243 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 ZNF138P52744 262 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 LINC01006Q8NI28 216 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 MS4A6AQ9H2W1 248 aa11.42□□□□□ -0.58
CPSF7-205ENST00000439958 SPRY2O43597 315 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 APCSP02743 223 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 DLX4Q92988 240 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-205ENST00000439958 A0A087X0K7 114 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 C2orf70A6NJV1 201 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 GPX1P07203 203 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 SRIP30626 198 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 ID1P41134 155 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 TMEM86BQ8N661 226 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
CPSF7-205ENST00000439958 ZNF253O75346 499 aa11.4□□□□□ -0.58
CPSF7-205ENST00000439958 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
CPSF7-205ENST00000439958 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
CPSF7-205ENST00000439958 RNF114Q9Y508 228 aa11.4□□□□□ -0.58
CPSF7-205ENST00000439958 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms