RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 ODF3Q96PU9 254 aa14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 TMEM167BQ9NRX6 74 aa14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 TENM2Q9NT68 2774 aa14.04□□□□□ -0.16
SEMA3B-206ENST00000439487 SMIM9A6NGZ8 99 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 DIRC3C9JPN6 131 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 TPT1P13693 172 aaKnown RBP14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 FAM74A1Q5RGS3 127 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 CASC10Q5T4H9 136 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 CMTM2Q8TAZ6 248 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 RXFP4Q8TDU9 374 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 TMPRSS5Q9H3S3 457 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 RPH3ALQ9UNE2 315 aa14.03□□□□□ -0.16
SEMA3B-206ENST00000439487 HBE1P02100 147 aa14.02□□□□□ -0.17
SEMA3B-206ENST00000439487 PRM2P04554 102 aa14.02□□□□□ -0.17
SEMA3B-206ENST00000439487 FHITP49789 147 aa14.02□□□□□ -0.17
SEMA3B-206ENST00000439487 TMEM78Q5T7P6 136 aa14.02□□□□□ -0.17
SEMA3B-206ENST00000439487 STOML3Q8TAV4 291 aa14.02□□□□□ -0.17
SEMA3B-206ENST00000439487 C11orf45Q8TAV5 145 aa14.02□□□□□ -0.17
SEMA3B-206ENST00000439487 TMED6Q8WW62 240 aa14.02□□□□□ -0.17
SEMA3B-206ENST00000439487 MAP1LC3B2A6NCE7 125 aa14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 ZNF705GA8MUZ8 300 aaPredicted RBP14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 NANOS2P60321 138 aaKnown RBP14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 PMS2P11Q13670 270 aa14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 ZFP69Q49AA0 526 aa14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 GFI1BQ5VTD9 330 aa14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 FAM19A4Q96LR4 140 aa14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 LINC01587Q99440 93 aa14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 MAP1LC3BQ9GZQ8 125 aa14.01□□□□□ -0.17
SEMA3B-206ENST00000439487 DYNC2H1Q8NCM8 4307 aaKnown RBP14□□□□□ -0.17
SEMA3B-206ENST00000439487 RBAKDNA6NC62 111 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 SLC25A5P05141 298 aaKnown RBP14□□□□□ -0.17
SEMA3B-206ENST00000439487 EMP1P54849 157 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 GNG5P63218 68 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 RRN3P1Q2M238 152 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 C9orf62Q8N4C0 152 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 Q8TAT8 98 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 FAM213BQ8TBF2 198 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 ZNF492Q9P255 531 aa14□□□□□ -0.17
SEMA3B-206ENST00000439487 LOC102723971A0A1B0GUV8 181 aa13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 CXorf65A6NEN9 183 aa13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 UMAD1C9J7I0 102 aa13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 ZNF138P52744 262 aa13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 GOLT1AQ6ZVE7 132 aa13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 TMEM256Q8N2U0 113 aa13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 CELA1Q9UNI1 258 aa13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 PLECQ15149 4684 aaKnown RBP13.99□□□□□ -0.17
SEMA3B-206ENST00000439487 TRAV12-3A0A0B4J271 114 aa13.98□□□□□ -0.17
SEMA3B-206ENST00000439487 UBE2G2P60604 165 aa13.98□□□□□ -0.17
SEMA3B-206ENST00000439487 SUMO1P63165 101 aaKnown RBP13.98□□□□□ -0.17
SEMA3B-206ENST00000439487 C7orf71A4D174 169 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 TMEM189A5PLL7 270 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 KLLNB2CW77 178 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 GGTLC3B5MD39 225 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 HTN1P15515 57 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 CRISP2P16562 243 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 AZU1P20160 251 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 BTN1A1Q13410 526 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 SLC51BQ86UW2 128 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 ZFAND2AQ8N6M9 145 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 ARL6IP6Q8N6S5 226 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 C20orf144Q9BQM9 153 aa13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 YTHDF2Q9Y5A9 579 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-206ENST00000439487 A0A1W2PRE2 83 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 H7BYZ3 331 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 GPX1P07203 203 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 TAS2R60P59551 318 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 PRR9Q5T870 116 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 DPPA3Q6W0C5 159 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 C5orf17Q8NAS9 161 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 SFT2D1Q8WV19 159 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 MBD3L1Q8WWY6 194 aa13.96□□□□□ -0.17
SEMA3B-206ENST00000439487 A0A1B0GV50 99 aa13.95□□□□□ -0.18
SEMA3B-206ENST00000439487 NKX2-5P52952 324 aaPredicted RBP13.95□□□□□ -0.18
SEMA3B-206ENST00000439487 ZNF767PQ75MW2 155 aa13.95□□□□□ -0.18
SEMA3B-206ENST00000439487 SGK494Q96LW2 274 aa13.95□□□□□ -0.18
SEMA3B-206ENST00000439487 NIPSNAP3BQ9BS92 247 aa13.95□□□□□ -0.18
SEMA3B-206ENST00000439487 EPDR1Q9UM22 224 aa13.95□□□□□ -0.18
SEMA3B-206ENST00000439487 TRAV8-1A0A0A6YYK1 113 aa13.94□□□□□ -0.18
SEMA3B-206ENST00000439487 FAM74A7A6NL05 159 aa13.94□□□□□ -0.18
SEMA3B-206ENST00000439487 TCRAP04437 139 aa13.94□□□□□ -0.18
SEMA3B-206ENST00000439487 NMBP08949 121 aa13.94□□□□□ -0.18
SEMA3B-206ENST00000439487 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
SEMA3B-206ENST00000439487 PHLDA1Q8WV24 401 aaPredicted RBP13.94□□□□□ -0.18
SEMA3B-206ENST00000439487 TRBV7-9A0A0J9YWB2 115 aa13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 ZNF324O75467 553 aaPredicted RBP13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 H2AFB1P0C5Y9 115 aa13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 SPART-AS1P0CW21 52 aa13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 C12orf74Q32Q52 190 aa13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 FAM222AQ5U5X8 452 aa13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 Q6ZQT7 251 aa13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 DKK2Q9UBU2 259 aa13.93□□□□□ -0.18
SEMA3B-206ENST00000439487 EPPK1P58107 5090 aaKnown RBP13.92□□□□□ -0.18
SEMA3B-206ENST00000439487 SERTM2A0A1B0GWG4 89 aa13.92□□□□□ -0.18
SEMA3B-206ENST00000439487 CEMP1Q6PRD7 247 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-206ENST00000439487 Q6ZTC4 211 aa13.92□□□□□ -0.18
SEMA3B-206ENST00000439487 LENEPQ9Y5L5 61 aa13.92□□□□□ -0.18
SEMA3B-206ENST00000439487 BIRC6Q9NR09 4857 aa13.92□□□□□ -0.18
SEMA3B-206ENST00000439487 PLAC8L1A1L4L8 177 aa13.91□□□□□ -0.18
SEMA3B-206ENST00000439487 NUPR2A6NF83 97 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms