RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 FLI1Q01543 452 aaPredicted RBP9.37□□□□□ -0.91
SCLT1-202ENST00000439369 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 MORN3Q6PF18 240 aaPredicted RBP9.37□□□□□ -0.91
SCLT1-202ENST00000439369 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 SMIM12Q96EX1 92 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 NDFIP1Q9BT67 221 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 ZNF492Q9P255 531 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 SORL1Q92673 2214 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 IGLV2-11P01706 119 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 TSPOP30536 169 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 FAM74A3Q4VXF1 159 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 SAPCD1Q5SSQ6 148 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 AMTNQ6UX39 209 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 FAM19A4Q96LR4 140 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 CITED4Q96RK1 184 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 VGLL1Q99990 258 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 SRD5A3Q9H8P0 318 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 TREM1Q9NP99 234 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 PSG8Q9UQ74 426 aa9.36□□□□□ -0.91
SCLT1-202ENST00000439369 KIR2DL5BA0A0G2JN68 375 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 KIR2DL5BA0A0G2JPC4 375 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 C9JCJ5 164 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 CRISP2P16562 243 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 LEPP41159 167 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 RPL35P42766 123 aaKnown RBP9.35□□□□□ -0.91
SCLT1-202ENST00000439369 DEFB1P60022 68 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 SRSF3P84103 164 aaKnown RBP9.35□□□□□ -0.91
SCLT1-202ENST00000439369 ZNF124Q15973 351 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 COX8CQ7Z4L0 72 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 Q86TA4 180 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 KIR2DL5AQ8N109 375 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 OR4B1Q8NGF8 309 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 KIR2DL5BQ8NHK3 375 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 WFDC10AQ9H1F0 79 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 TUBA4BQ9H853 241 aa9.35□□□□□ -0.91
SCLT1-202ENST00000439369 LOC102724200A0A096LPH7 203 aaPredicted RBP9.34□□□□□ -0.91
SCLT1-202ENST00000439369 TRAV8-1A0A0A6YYK1 113 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 C9JQL5 133 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 LTAP01374 205 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
SCLT1-202ENST00000439369 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
SCLT1-202ENST00000439369 CT45A10P0DMU9 189 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 APOC4P55056 127 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 ERCC8Q13216 396 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 LINC00479Q96M42 142 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 PARLQ9H300 379 aa9.34□□□□□ -0.91
SCLT1-202ENST00000439369 AURKAIP1Q9NWT8 199 aaPredicted RBP9.34□□□□□ -0.91
SCLT1-202ENST00000439369 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 TRAV34A0A0B4J273 112 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 UBE2CO00762 179 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 GNG4P50150 75 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 SOHLH1Q5JUK2 328 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 LINC00322Q6ZN03 302 aaPredicted RBP9.33□□□□□ -0.92
SCLT1-202ENST00000439369 PRNTQ86SH4 94 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 DERL1Q9BUN8 251 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 LY96Q9Y6Y9 160 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 TRRAPQ9Y4A5 3859 aa9.33□□□□□ -0.92
SCLT1-202ENST00000439369 RBMY1BA6NDE4 496 aaKnown RBP9.32□□□□□ -0.92
SCLT1-202ENST00000439369 RBMY1EA6NEQ0 496 aaKnown RBP9.32□□□□□ -0.92
SCLT1-202ENST00000439369 KLLNB2CW77 178 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 SFTA3P0C7M3 94 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 RBMY1DP0C7P1 496 aaKnown RBP9.32□□□□□ -0.92
SCLT1-202ENST00000439369 CDKN1BP46527 198 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 CENPWQ5EE01 88 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 BAGE2Q86Y30 109 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 ZFAND2AQ8N6M9 145 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 Q8TAT8 98 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 C20orf144Q9BQM9 153 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 MLST8Q9BVC4 326 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
SCLT1-202ENST00000439369 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
SCLT1-202ENST00000439369 ZNF727A8MUV8 499 aa9.31□□□□□ -0.92
SCLT1-202ENST00000439369 CEBPGP53567 150 aa9.31□□□□□ -0.92
SCLT1-202ENST00000439369 SMUG1Q53HV7 270 aa9.31□□□□□ -0.92
SCLT1-202ENST00000439369 TVP23CQ96ET8 276 aa9.31□□□□□ -0.92
SCLT1-202ENST00000439369 CSTL1Q9H114 145 aa9.31□□□□□ -0.92
SCLT1-202ENST00000439369 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
SCLT1-202ENST00000439369 K7EIL1 84 aa9.3□□□□□ -0.92
SCLT1-202ENST00000439369 GPX1P07203 203 aa9.3□□□□□ -0.92
SCLT1-202ENST00000439369 PRB4P10163 310 aaPredicted RBP9.3□□□□□ -0.92
SCLT1-202ENST00000439369 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
SCLT1-202ENST00000439369 ZNF674Q2M3X9 581 aa9.3□□□□□ -0.92
SCLT1-202ENST00000439369 SGK494Q96LW2 274 aa9.3□□□□□ -0.92
SCLT1-202ENST00000439369 ASCL2Q99929 193 aa9.3□□□□□ -0.92
SCLT1-202ENST00000439369 C7orf71A4D174 169 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 INSP01308 110 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 TMEM241Q24JQ0 296 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 Q6AWC8 147 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 TMEM256Q8N2U0 113 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 NIPSNAP3BQ9BS92 247 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms