RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 DSCAMO60469 2012 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 NDUFS7O75251 213 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 FMC1Q96HJ9 113 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 SPG11Q96JI7 2443 aa12.58□□□□□ -0.4
DHFR-201ENST00000439211 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
DHFR-201ENST00000439211 M0QXV9 152 aa12.57□□□□□ -0.4
DHFR-201ENST00000439211 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
DHFR-201ENST00000439211 LINC00322Q6ZN03 302 aaPredicted RBP12.57□□□□□ -0.4
DHFR-201ENST00000439211 PRSS46E5RG02 174 aa12.57□□□□□ -0.4
DHFR-201ENST00000439211 NDUFV3P56181 108 aaKnown RBP12.57□□□□□ -0.4
DHFR-201ENST00000439211 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
DHFR-201ENST00000439211 SLC25A2Q9BXI2 301 aa12.57□□□□□ -0.4
DHFR-201ENST00000439211 AAMDCQ9H7C9 122 aa12.57□□□□□ -0.4
DHFR-201ENST00000439211 TLN1Q9Y490 2541 aaKnown RBP12.57□□□□□ -0.4
DHFR-201ENST00000439211 MGAQ8IWI9 3026 aa12.57□□□□□ -0.4
DHFR-201ENST00000439211 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
DHFR-201ENST00000439211 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
DHFR-201ENST00000439211 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
DHFR-201ENST00000439211 BSPH1Q075Z2 132 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 TMEM200BQ69YZ2 307 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
DHFR-201ENST00000439211 TRAV40A0A0B4J280 105 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 C17orf100A8MU93 164 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 Q9H3A6 140 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 SEM1Q6ZVN7 128 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 NGBQ9NPG2 151 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 RAX2Q96IS3 184 aa12.56□□□□□ -0.4
DHFR-201ENST00000439211 TET2Q6N021 2002 aaPredicted RBP12.55□□□□□ -0.4
DHFR-201ENST00000439211 HAX1O00165 279 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 C1orf159Q96HA4 380 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 TMEM8BA6NDV4 472 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 CEP295Q9C0D2 2601 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 E7EUB6 86 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 FCN3O75636 299 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 WT1-ASQ06250 92 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 CT83Q5H943 113 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 LYPD2Q6UXB3 125 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 S4R3C0 116 aa12.55□□□□□ -0.4
DHFR-201ENST00000439211 ATP5IP56385 69 aaPredicted RBP12.54□□□□□ -0.4
DHFR-201ENST00000439211 TEN1Q86WV5 123 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 GFRA4Q9GZZ7 299 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 TPSG1Q9NRR2 321 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 ONECUT1Q9UBC0 465 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 TNFRSF18Q9Y5U5 241 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 TMEM213A2RRL7 107 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 LHBP01229 141 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
DHFR-201ENST00000439211 LYNX1G3V0Z9 82 aa12.53□□□□□ -0.4
DHFR-201ENST00000439211 TCRAP04437 139 aa12.53□□□□□ -0.4
DHFR-201ENST00000439211 LYNX1P0DP58 116 aa12.53□□□□□ -0.4
DHFR-201ENST00000439211 ANKHD1Q8IWZ3 2542 aaKnown RBP12.53□□□□□ -0.4
DHFR-201ENST00000439211 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
DHFR-201ENST00000439211 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
DHFR-201ENST00000439211 RPL7P18124 248 aaKnown RBP12.53□□□□□ -0.4
DHFR-201ENST00000439211 TMEM155Q4W5P6 130 aa12.53□□□□□ -0.4
DHFR-201ENST00000439211 NDUFA4L2Q9NRX3 87 aa12.53□□□□□ -0.4
DHFR-201ENST00000439211 HIGD1AQ9Y241 93 aa12.52□□□□□ -0.4
DHFR-201ENST00000439211 IGLV3-9A0A075B6K5 115 aa12.52□□□□□ -0.41
DHFR-201ENST00000439211 TNRC6BQ9UPQ9 1833 aaKnown RBP12.52□□□□□ -0.41
DHFR-201ENST00000439211 C10orf126Q8N4M7 172 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 ATP6V0E2Q8NHE4 81 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 CGB3P0DN86 165 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 CGB7P0DN87 165 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 MRPL23Q16540 153 aaKnown RBP12.51□□□□□ -0.41
DHFR-201ENST00000439211 NFE4Q86UQ8 179 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 FAM167A-AS1Q96KT0 104 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 VKORC1Q9BQB6 163 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 RAB1BQ9H0U4 201 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 A0A1W2PPI3 338 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 C9JAW5 83 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 FOXC1Q12948 553 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 PPDPFQ9H3Y8 114 aa12.51□□□□□ -0.41
DHFR-201ENST00000439211 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 POU2AF1Q16633 256 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 EXOC3-AS1Q8N2X6 119 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 BEX4Q9NWD9 120 aaPredicted RBP12.5□□□□□ -0.41
DHFR-201ENST00000439211 ZNF492Q9P255 531 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 K7EM74 188 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 ATP5LO75964 103 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 GATA4P43694 442 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 ASPMQ8IZT6 3477 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 CR1LQ2VPA4 569 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 TMEM30BQ3MIR4 351 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 TMEM167AQ8TBQ9 72 aa12.5□□□□□ -0.41
DHFR-201ENST00000439211 C3orf36Q3SXR2 165 aa12.49□□□□□ -0.41
DHFR-201ENST00000439211 FXYD5Q96DB9 178 aa12.49□□□□□ -0.41
DHFR-201ENST00000439211 MRPL36Q9P0J6 103 aaKnown RBP12.49□□□□□ -0.41
DHFR-201ENST00000439211 RAXQ9Y2V3 346 aa12.49□□□□□ -0.41
DHFR-201ENST00000439211 TRAV8-4A0A0B4J246 113 aa12.49□□□□□ -0.41
DHFR-201ENST00000439211 CNTFRP26992 372 aa12.49□□□□□ -0.41
DHFR-201ENST00000439211 ZFP2Q6ZN57 461 aa12.49□□□□□ -0.41
DHFR-201ENST00000439211 MRPL35Q9NZE8 188 aaKnown RBP12.49□□□□□ -0.41
DHFR-201ENST00000439211 NPYP01303 97 aa12.48□□□□□ -0.41
DHFR-201ENST00000439211 ORM1P02763 201 aa12.48□□□□□ -0.41
DHFR-201ENST00000439211 ANKRD29Q8N6D5 301 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms