RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 SRSF1Q07955 248 aaKnown RBP eCLIP9.73□□□□□ -0.85
TCOF1-205ENST00000439160 C8orf49Q96NF6 230 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 TRGV11A0A075B6L2 103 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 IGHV4-38-2P0DP08 117 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 DEFB112Q30KQ8 113 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 UTF1Q5T230 341 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 FXYD5Q96DB9 178 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 UBE2E2Q96LR5 201 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 ZFP36P26651 326 aaKnown RBP9.73□□□□□ -0.85
TCOF1-205ENST00000439160 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 IFI27L1Q96BM0 104 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 CENPVL3A0A0U1RRI6 287 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 KLF2Q9Y5W3 355 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-205ENST00000439160 SORL1Q92673 2214 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 TNRC6AQ8NDV7 1962 aaKnown RBP9.72□□□□□ -0.85
TCOF1-205ENST00000439160 H3BRN7 92 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 PROP1O75360 226 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 IGLV1-47P01700 117 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 ODF3L1Q8IXM7 274 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 CHCHD1Q96BP2 118 aaKnown RBP9.72□□□□□ -0.85
TCOF1-205ENST00000439160 C2orf88Q9BSF0 95 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 C5orf42Q9H799 3197 aa9.72□□□□□ -0.85
TCOF1-205ENST00000439160 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.85
TCOF1-205ENST00000439160 RPL35AP18077 110 aaKnown RBP9.71□□□□□ -0.85
TCOF1-205ENST00000439160 PLP1P60201 277 aa9.71□□□□□ -0.85
TCOF1-205ENST00000439160 TMEM95Q3KNT9 176 aa9.71□□□□□ -0.85
TCOF1-205ENST00000439160 LYPD6BQ8NI32 183 aa9.71□□□□□ -0.85
TCOF1-205ENST00000439160 CYSLTR1Q9Y271 337 aa9.71□□□□□ -0.85
TCOF1-205ENST00000439160 NUP210LQ5VU65 1888 aa9.71□□□□□ -0.85
TCOF1-205ENST00000439160 E7EUB6 86 aa9.71□□□□□ -0.85
TCOF1-205ENST00000439160 TTC9CQ8N5M4 171 aa9.71□□□□□ -0.85
TCOF1-205ENST00000439160 LRP4O75096 1905 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 TMEM213A2RRL7 107 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 BLCAPP62952 87 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 IGHV7-81A0A0B4J1V7 117 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 J3QLI3 93 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 FABP2P12104 132 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 GTSCR1Q86UQ5 136 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 VCX2Q9H322 139 aa9.71□□□□□ -0.86
TCOF1-205ENST00000439160 NACAE9PAV3 2078 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 TRAV9-2A0A087WT02 112 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 DLEU1O43261 78 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 Q8N7P7 452 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 TRGV4A0A0C4DH28 118 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-205ENST00000439160 ORMDL2Q53FV1 153 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 DTX2Q86UW9 622 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 TMEM75Q8N9X5 138 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 TMEM101Q96IK0 257 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 SNHG12Q9BXW3 62 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 FASNP49327 2511 aaKnown RBP9.7□□□□□ -0.86
TCOF1-205ENST00000439160 A0A087WWL8 130 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 C3orf79P0CE67 100 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 NDUFA4O00483 81 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 IGKV1-17P01599 117 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 HLA-DMBP28068 263 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 RIPPLY3P57055 190 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 SPINK13Q1W4C9 94 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 PET117Q6UWS5 81 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 C10orf105Q8TEF2 133 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 PRR25Q96S07 402 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 MCRIP2Q9BUT9 160 aaKnown RBP9.7□□□□□ -0.86
TCOF1-205ENST00000439160 TMEM14CQ9P0S9 112 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 TOMM7Q9P0U1 55 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 V9GYV3 84 aa9.7□□□□□ -0.86
TCOF1-205ENST00000439160 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
TCOF1-205ENST00000439160 MORN5Q5VZ52 161 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 POLR3KQ9Y2Y1 108 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-205ENST00000439160 ARHGAP32A7KAX9 2087 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 TRGV1A0A0A0MS02 117 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 K7EIM0 57 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 IGHV3-53P01767 116 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 SMIM12Q96EX1 92 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 ALKBH7Q9BT30 221 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-205ENST00000439160 DPH3P1Q9H4G8 78 aa9.69□□□□□ -0.86
TCOF1-205ENST00000439160 ZNF876PQ49A33 203 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 CIDEAO60543 219 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 DAZAP2Q15038 168 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-205ENST00000439160 VGLL1Q99990 258 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 ZNF492Q9P255 531 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 IGKV1OR2-108A0A075B7D4 117 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 C19orf84I3L1E1 186 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 CGB3P0DN86 165 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 CGB7P0DN87 165 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 MRAP2Q96G30 205 aa9.68□□□□□ -0.86
TCOF1-205ENST00000439160 DPM2O94777 84 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 LAGE3Q14657 143 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 BRWD1-AS2P59051 145 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 DEFB113Q30KQ7 82 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 I3L2K1 104 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms