RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TMEM189A5PLL7 270 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 KLLNB2CW77 178 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 IGLL5B9A064 214 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 ZNF324O75467 553 aaPredicted RBP9.42□□□□□ -0.9
LINC00399-201ENST00000439008 JTBO76095 146 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 SPART-AS1P0CW21 52 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 HTN1P15515 57 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 TSPOP30536 169 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 CDC34P49427 236 aaPredicted RBP9.42□□□□□ -0.9
LINC00399-201ENST00000439008 TAS2R45P59539 299 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 TAS2R60P59551 318 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 Q8TAT8 98 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 RNASE8Q8TDE3 154 aaKnown RBP9.42□□□□□ -0.9
LINC00399-201ENST00000439008 C2CD4CQ8TF44 421 aa9.42□□□□□ -0.9
LINC00399-201ENST00000439008 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 CRISP2P16562 243 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 SERF2P84101 59 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 PQLC2Q6ZP29 291 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 TMEM256Q8N2U0 113 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 SUN5Q8TC36 379 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 ST6GAL2Q96JF0 529 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 LINC00477Q96M19 166 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 NIPSNAP3BQ9BS92 247 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
LINC00399-201ENST00000439008 IGHV4-4A0A075B6R2 117 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 PGPA6NDG6 321 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 LY6G6CO95867 125 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 GCHFRP30047 84 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 LEPP41159 167 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 KCNRGQ8N5I3 272 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 HYLS1Q96M11 299 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 C20orf144Q9BQM9 153 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 OTORQ9NRC9 128 aa9.4□□□□□ -0.9
LINC00399-201ENST00000439008 BORCS7-ASMTA0A0B4J1R7 106 aa9.39□□□□□ -0.91
LINC00399-201ENST00000439008 C7orf71A4D174 169 aa9.39□□□□□ -0.91
LINC00399-201ENST00000439008 H7BYZ3 331 aa9.39□□□□□ -0.91
LINC00399-201ENST00000439008 RNASE4P34096 147 aaKnown RBP9.39□□□□□ -0.91
LINC00399-201ENST00000439008 GNG5P63218 68 aa9.39□□□□□ -0.91
LINC00399-201ENST00000439008 Q6ZNX1 250 aa9.39□□□□□ -0.91
LINC00399-201ENST00000439008 GNPNAT1Q96EK6 184 aaPredicted RBP9.39□□□□□ -0.91
LINC00399-201ENST00000439008 TVP23CQ96ET8 276 aa9.39□□□□□ -0.91
LINC00399-201ENST00000439008 TRAV8-1A0A0A6YYK1 113 aa9.38□□□□□ -0.91
LINC00399-201ENST00000439008 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
LINC00399-201ENST00000439008 ZNF138P52744 262 aa9.38□□□□□ -0.91
LINC00399-201ENST00000439008 TMEM78Q5T7P6 136 aa9.38□□□□□ -0.91
LINC00399-201ENST00000439008 TMPRSS5Q9H3S3 457 aa9.38□□□□□ -0.91
LINC00399-201ENST00000439008 TP53TG3Q9ULZ0 132 aa9.38□□□□□ -0.91
LINC00399-201ENST00000439008 RBAKDNA6NC62 111 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 LYRM9A8MSI8 78 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 HMSDA8MTL9 139 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 TAAR5O14804 337 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 MBP02144 154 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 HTN3P15516 51 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 FHITP49789 147 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 DAD1P61803 113 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 ZNF345Q14585 488 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 GOLT1AQ6ZVE7 132 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
LINC00399-201ENST00000439008 C16orf74Q96GX8 76 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 ACTR3CQ9C0K3 210 aaPredicted RBP9.37□□□□□ -0.91
LINC00399-201ENST00000439008 NOP10Q9NPE3 64 aaKnown RBP9.37□□□□□ -0.91
LINC00399-201ENST00000439008 RPH3ALQ9UNE2 315 aa9.37□□□□□ -0.91
LINC00399-201ENST00000439008 GPX1P07203 203 aa9.36□□□□□ -0.91
LINC00399-201ENST00000439008 NMBP08949 121 aa9.36□□□□□ -0.91
LINC00399-201ENST00000439008 FGF8P55075 233 aaPredicted RBP9.36□□□□□ -0.91
LINC00399-201ENST00000439008 LGALS9CQ6DKI2 356 aa9.36□□□□□ -0.91
LINC00399-201ENST00000439008 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
LINC00399-201ENST00000439008 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
LINC00399-201ENST00000439008 C11orf72Q8NBR9 251 aa9.36□□□□□ -0.91
LINC00399-201ENST00000439008 SGK494Q96LW2 274 aa9.36□□□□□ -0.91
LINC00399-201ENST00000439008 CTXND1A0A1B0GTU2 59 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 TEX48A0A1B0GUV7 120 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 CXorf1O96002 111 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 CSN1S1P47710 185 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 RXFP4Q8TDU9 374 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 ARPC5LQ9BPX5 153 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 PYGO2Q9BRQ0 406 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 LINC00467Q9BRT7 94 aa9.35□□□□□ -0.91
LINC00399-201ENST00000439008 TIMM8BQ9Y5J9 83 aaPredicted RBP9.35□□□□□ -0.91
LINC00399-201ENST00000439008 TRBV7-9A0A0J9YWB2 115 aa9.34□□□□□ -0.91
LINC00399-201ENST00000439008 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
LINC00399-201ENST00000439008 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
LINC00399-201ENST00000439008 Q6ZTI0 123 aa9.34□□□□□ -0.91
LINC00399-201ENST00000439008 GSN-AS1Q9NRJ2 163 aa9.34□□□□□ -0.91
LINC00399-201ENST00000439008 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
LINC00399-201ENST00000439008 BCL2L11O43521 198 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 TCRAP04437 139 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 TCTAP57738 103 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 LGALSLQ3ZCW2 172 aaPredicted RBP9.33□□□□□ -0.92
LINC00399-201ENST00000439008 AKR1C8PQ5T2L2 129 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms