RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 ARPC5LQ9BPX5 153 aa8.23□□□□□ -1.09
COL28A1-203ENST00000435823 ACTR3CQ9C0K3 210 aaPredicted RBP8.23□□□□□ -1.09
COL28A1-203ENST00000435823 CELA1Q9UNI1 258 aa8.23□□□□□ -1.09
COL28A1-203ENST00000435823 IGKV2-40A0A087WW87 121 aaPredicted RBP8.22□□□□□ -1.09
COL28A1-203ENST00000435823 LCE6AA0A183 80 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 HMSDA8MTL9 139 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 ZNF705GA8MUZ8 300 aaPredicted RBP8.22□□□□□ -1.09
COL28A1-203ENST00000435823 H7BYZ3 331 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 IGKV2D-40P01614 121 aaPredicted RBP8.22□□□□□ -1.09
COL28A1-203ENST00000435823 STAG3L2P0CL84 134 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 STAG3L3P0CL85 134 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 ARL14EPLP0DKL9 152 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 TAS2R60P59551 318 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 ERCC8Q13216 396 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 AKR1C8PQ5T2L2 129 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 KCNRGQ8N5I3 272 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 CMTM2Q8TAZ6 248 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 RXFP4Q8TDU9 374 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 RAB24Q969Q5 203 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 OTORQ9NRC9 128 aa8.22□□□□□ -1.09
COL28A1-203ENST00000435823 YTHDF2Q9Y5A9 579 aaKnown RBP8.22□□□□□ -1.09
COL28A1-203ENST00000435823 CSMD3Q7Z407 3707 aa8.21□□□□□ -1.09
COL28A1-203ENST00000435823 TRAV10A0A0B4J240 114 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 A0A0D9SG52 128 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 RBAKDNA6NC62 111 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 J3KRW8 73 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 CXorf1O96002 111 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.1
COL28A1-203ENST00000435823 HTN1P15515 57 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 Q6ZTC4 211 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 C2CD4CQ8TF44 421 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 NIPSNAP3BQ9BS92 247 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 CYTL1Q9NRR1 136 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 DKK2Q9UBU2 259 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 STARD9Q9P2P6 4700 aa8.21□□□□□ -1.1
COL28A1-203ENST00000435823 KANTRA0A1W2PQU2 76 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 PGPA6NDG6 321 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 NMBP08949 121 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 GCHFRP30047 84 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 KIR3DS1Q14943 382 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 C12orf74Q32Q52 190 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 Q6ZNX1 250 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 ZNF767PQ75MW2 155 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 OR11H4Q8NGC9 324 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 C16orf74Q96GX8 76 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 HYLS1Q96M11 299 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 VGLL1Q99990 258 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 TMEM167BQ9NRX6 74 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
COL28A1-203ENST00000435823 KMT2CQ8NEZ4 4911 aaKnown RBP8.2□□□□□ -1.1
COL28A1-203ENST00000435823 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 CTXND1A0A1B0GTU2 59 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 C7orf71A4D174 169 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 DIRC3C9JPN6 131 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 BCL2L11O43521 198 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 PFDN1O60925 122 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 PRM2P04554 102 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 GPX1P07203 203 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 CRISP2P16562 243 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 ZNF138P52744 262 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 TCTAP57738 103 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 EIF5AP63241 154 aaKnown RBP8.19□□□□□ -1.1
COL28A1-203ENST00000435823 ZNF493Q6ZR52 646 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 IQCF2Q8IXL9 164 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 ARL6IP6Q8N6S5 226 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 FAM19A4Q96LR4 140 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 RPH3ALQ9UNE2 315 aa8.19□□□□□ -1.1
COL28A1-203ENST00000435823 DEFB131BA0A096LNP1 70 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 KLLNB2CW77 178 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 IGLL5B9A064 214 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 AZU1P20160 251 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 DAD1P61803 113 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 Q8TAT8 98 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 SUN5Q8TC36 379 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
COL28A1-203ENST00000435823 ST6GAL2Q96JF0 529 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 PYGO2Q9BRQ0 406 aa8.18□□□□□ -1.1
COL28A1-203ENST00000435823 ZNF471Q9BX82 626 aaPredicted RBP8.18□□□□□ -1.1
COL28A1-203ENST00000435823 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
COL28A1-203ENST00000435823 RNASE4P34096 147 aaKnown RBP8.17□□□□□ -1.1
COL28A1-203ENST00000435823 CD300CQ08708 224 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 BTN1A1Q13410 526 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 GOLT1AQ6ZVE7 132 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 SSX7Q7RTT5 188 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 TCTE3Q8IZS6 198 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 C5orf17Q8NAS9 161 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 TIMM8BQ9Y5J9 83 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-203ENST00000435823 LENEPQ9Y5L5 61 aa8.17□□□□□ -1.1
COL28A1-203ENST00000435823 SERTM2A0A1B0GWG4 89 aa8.16□□□□□ -1.1
COL28A1-203ENST00000435823 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
COL28A1-203ENST00000435823 K7EQM0 130 aa8.16□□□□□ -1.1
COL28A1-203ENST00000435823 LY6G6CO95867 125 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms