RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 WI2-2373I1.2A0A1W2PRP0 233 aa9.46□□□□□ -0.9
CLDN4-203ENST00000435050 FAM231DQ6ZW35 169 aa9.46□□□□□ -0.9
CLDN4-203ENST00000435050 FER1L6-AS1Q8NA97 138 aa9.46□□□□□ -0.9
CLDN4-203ENST00000435050 ZNF324O75467 553 aaPredicted RBP9.45□□□□□ -0.9
CLDN4-203ENST00000435050 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
CLDN4-203ENST00000435050 LYPD1Q8N2G4 141 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 Q8N6K4 173 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 OR8A1Q8NGG7 326 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 TMEM213A2RRL7 107 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 M0QZK8 103 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 M0R143 59 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 IGLC2P0DOY2 106 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 FXYD7P58549 80 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 DSCR9P59020 149 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 DEFB1P60022 68 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 USP24Q9UPU5 2620 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 PMCHL2Q9BQD1 86 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 CFAP46Q8IYW2 2715 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 GPX1P07203 203 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 EBI3Q14213 229 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 Q6ZS46 218 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 NIT1Q86X76 327 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
CLDN4-203ENST00000435050 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 NCR2O95944 276 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 AVPP01185 164 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 PAX1P15863 534 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 PDE6HQ13956 83 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 ZNF843Q8N446 348 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 C18orf32Q8TCD1 76 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 MCRIP2Q9BUT9 160 aaKnown RBP9.44□□□□□ -0.9
CLDN4-203ENST00000435050 HAX1O00165 279 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 ZNF664Q8N3J9 261 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 PAX2Q02962 417 aa9.44□□□□□ -0.9
CLDN4-203ENST00000435050 LBHQ53QV2 105 aaPredicted RBP9.44□□□□□ -0.9
CLDN4-203ENST00000435050 SMKR1H3BMG3 65 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 Q6ZWC4 215 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 PRR25Q96S07 402 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 M0R381 172 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 KRTAP10-9P60411 292 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 C8orf86Q6ZUL3 223 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 C14orf144Q96I85 54 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 RHPN1-AS1Q9BWJ2 59 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 AMN1Q8IY45 258 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 KLF12Q9Y4X4 402 aa9.43□□□□□ -0.9
CLDN4-203ENST00000435050 MGPP08493 103 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 OR5AL1P0C617 328 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 UNQ9165/PRO28630Q6UXU0 137 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 OR4C5Q8NGB2 326 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 A0A1W2PRX2 142 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 FAM223BA6NKX1 122 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 SPRY2O43597 315 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 BUB3O43684 328 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 MYCNOSP40205 109 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 OR10J3Q5JRS4 329 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 ATP5L2Q7Z4Y8 100 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 FAM223AQ8IWN6 122 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 ZNF492Q9P255 531 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 F6UB75 175 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 SPATA45Q537H7 98 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 RNASE4P34096 147 aaKnown RBP9.42□□□□□ -0.9
CLDN4-203ENST00000435050 PRELID3AQ96N28 172 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
CLDN4-203ENST00000435050 F5H697 171 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 ZNF688P0C7X2 276 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 COA6Q5JTJ3 125 aaKnown RBP9.41□□□□□ -0.9
CLDN4-203ENST00000435050 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 Q6ZN92 141 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 PRSS22Q9GZN4 317 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 EVI2AP22794 236 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 D6R8Y8 96 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 F8W735 103 aaPredicted RBP9.41□□□□□ -0.9
CLDN4-203ENST00000435050 Q0VG73 95 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 PRDM13Q9H4Q3 707 aa9.41□□□□□ -0.9
CLDN4-203ENST00000435050 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
CLDN4-203ENST00000435050 SYNJ2BPP57105 145 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.9
CLDN4-203ENST00000435050 A8MWP6 167 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 HOXA3O43365 443 aaPredicted RBP9.4□□□□□ -0.9
CLDN4-203ENST00000435050 LINC00614P0C842 121 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
CLDN4-203ENST00000435050 C18orf15Q96N68 181 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 MAP1LC3CQ9BXW4 147 aa9.4□□□□□ -0.9
CLDN4-203ENST00000435050 H3BVH4 76 aa9.4□□□□□ -0.91
CLDN4-203ENST00000435050 HIST2H2BDQ6DRA6 164 aa9.4□□□□□ -0.91
CLDN4-203ENST00000435050 SMIM12Q96EX1 92 aa9.4□□□□□ -0.91
CLDN4-203ENST00000435050 USMG5Q96IX5 58 aa9.4□□□□□ -0.91
CLDN4-203ENST00000435050 MLST8Q9BVC4 326 aa9.4□□□□□ -0.91
CLDN4-203ENST00000435050 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.91
CLDN4-203ENST00000435050 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
CLDN4-203ENST00000435050 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
CLDN4-203ENST00000435050 ID1P41134 155 aa9.39□□□□□ -0.91
CLDN4-203ENST00000435050 PEF1Q9UBV8 284 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms