RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 MRPL53Q96EL3 112 aaKnown RBP9.89□□□□□ -0.83
DDX56-204ENST00000431640 A0A0G2JLM5 398 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 ZNF705FA8MVS1 300 aaPredicted RBP9.88□□□□□ -0.83
DDX56-204ENST00000431640 FSHBP01225 129 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 ZNF705DP0CH99 300 aaPredicted RBP9.88□□□□□ -0.83
DDX56-204ENST00000431640 ZNF705BP0CI00 300 aaPredicted RBP9.88□□□□□ -0.83
DDX56-204ENST00000431640 ARL3P36405 182 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 AMTP48728 403 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 DEFA6Q01524 100 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 Q6ZWC4 215 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 ZNF664Q8N3J9 261 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 GATD1Q8NB37 220 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 C8orf49Q96NF6 230 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 HIVEP1P15822 2718 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 CUBNO60494 3623 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.88□□□□□ -0.83
DDX56-204ENST00000431640 NDUFA4O00483 81 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 IGHG4P01861 327 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 APOHP02749 345 aaPredicted RBP9.88□□□□□ -0.83
DDX56-204ENST00000431640 DDTP30046 118 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 FAM209BQ5JX69 171 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 SSBP4Q9BWG4 385 aaPredicted RBP9.88□□□□□ -0.83
DDX56-204ENST00000431640 NRN1Q9NPD7 142 aa9.88□□□□□ -0.83
DDX56-204ENST00000431640 ANK3Q12955 4377 aaKnown RBP9.88□□□□□ -0.83
DDX56-204ENST00000431640 IGHV3OR16-8A0A075B7F1 116 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 IGKV2-40A0A087WW87 121 aaPredicted RBP9.87□□□□□ -0.83
DDX56-204ENST00000431640 SH2D1AO60880 128 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 HSBP1O75506 76 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 IGKV2D-40P01614 121 aaPredicted RBP9.87□□□□□ -0.83
DDX56-204ENST00000431640 RAB4AP20338 218 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 IL17RELQ6ZVW7 336 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 RCHY1Q96PM5 261 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 LINC00527Q9UJ94 153 aa9.87□□□□□ -0.83
DDX56-204ENST00000431640 LOC102724200A0A096LPH7 203 aaPredicted RBP9.86□□□□□ -0.83
DDX56-204ENST00000431640 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
DDX56-204ENST00000431640 CHCHD1Q96BP2 118 aaKnown RBP9.86□□□□□ -0.83
DDX56-204ENST00000431640 CSPG4Q6UVK1 2322 aa9.86□□□□□ -0.83
DDX56-204ENST00000431640 MXRA5Q9NR99 2828 aa9.86□□□□□ -0.83
DDX56-204ENST00000431640 TLN2Q9Y4G6 2542 aa9.86□□□□□ -0.83
DDX56-204ENST00000431640 CD5LO43866 347 aa9.85□□□□□ -0.83
DDX56-204ENST00000431640 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
DDX56-204ENST00000431640 PMCHP20382 165 aa9.85□□□□□ -0.83
DDX56-204ENST00000431640 NIT1Q86X76 327 aa9.85□□□□□ -0.83
DDX56-204ENST00000431640 ASCL2Q99929 193 aa9.85□□□□□ -0.83
DDX56-204ENST00000431640 VGLL1Q99990 258 aa9.85□□□□□ -0.83
DDX56-204ENST00000431640 PF4V1P10720 104 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 BLCAPP62952 87 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 ZNF493Q6ZR52 646 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 REC114Q7Z4M0 266 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 PPP1R14DQ9NXH3 145 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 IGHV3-66A0A0C4DH42 116 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 TMEM89A2RUT3 159 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 ARMS2P0C7Q2 107 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 HLA-DMBP28068 263 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 KRTDAPP60985 99 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 IGFL4Q6B9Z1 124 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 TEX43Q6ZNM6 134 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 C8orf86Q6ZUL3 223 aa9.84□□□□□ -0.83
DDX56-204ENST00000431640 M0R2Z0 102 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 ZNF207O43670 478 aaKnown RBP9.83□□□□□ -0.84
DDX56-204ENST00000431640 LY6G6DO95868 133 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 NTF3P20783 257 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 HIST1H1AQ02539 215 aaPredicted RBP9.83□□□□□ -0.84
DDX56-204ENST00000431640 TMEM78Q5T7P6 136 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 RNASEKQ6P5S7 137 aaKnown RBP9.83□□□□□ -0.84
DDX56-204ENST00000431640 LYZL1Q6UWQ5 148 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 C9orf47Q6ZRZ4 202 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 C9orf139Q6ZV77 190 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 Q71RC1 249 aaPredicted RBP9.83□□□□□ -0.84
DDX56-204ENST00000431640 OR4X2Q8NGF9 303 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
DDX56-204ENST00000431640 TRAV8-2A0A0B4J237 113 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 LINC00614P0C842 121 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 ZNF138P52744 262 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 CFHR3Q02985 330 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 DEFB112Q30KQ8 113 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 FAM19A2Q8N3H0 131 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 C16orf92Q96LL3 132 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 NPFFR1Q9GZQ6 430 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 LENEPQ9Y5L5 61 aa9.82□□□□□ -0.84
DDX56-204ENST00000431640 IGHV3OR16-13A0A075B7E8 117 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 IGHV3-74A0A0B4J1X5 117 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 OR5AL1P0C617 328 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 CD33P20138 364 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 ERCC8Q13216 396 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 RNF182Q8N6D2 247 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 FER1L6-AS1Q8NA97 138 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 Q8TAT8 98 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 C14orf144Q96I85 54 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 TPPP3Q9BW30 176 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 AGPAT4-IT1Q9H0P7 198 aa9.81□□□□□ -0.84
DDX56-204ENST00000431640 SONP18583 2426 aaKnown RBP9.81□□□□□ -0.84
DDX56-204ENST00000431640 IGHV3-49A0A0A0MS15 119 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 KIR2DL5BA0A0G2JN68 375 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 KIR2DL5BA0A0G2JPC4 375 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 K7EMT4 169 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 OVOL1O14753 267 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms