RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 CTDSP1Q9GZU7 261 aa9.53□□□□□ -0.88
HMGB3P4-201ENST00000428776 PPP1R14DQ9NXH3 145 aa9.53□□□□□ -0.88
HMGB3P4-201ENST00000428776 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 IGLV1-51P01701 117 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 MGST1P10620 155 aaKnown RBP9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 TMEM78Q5T7P6 136 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 SHISA2Q6UWI4 295 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 C12orf54Q6X4T0 127 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 NHLRC2Q8NBF2 726 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 ANAPC16Q96DE5 110 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 LINC00477Q96M19 166 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 SORL1Q92673 2214 aa9.52□□□□□ -0.89
HMGB3P4-201ENST00000428776 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 PPP1R2P9O14990 202 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 SCO1O75880 301 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 INSL3P51460 131 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 ZNF138P52744 262 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 ERCC8Q13216 396 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 RNF212Q495C1 297 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 PSMG4Q5JS54 123 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 COX8CQ7Z4L0 72 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 FAM24BQ8N5W8 94 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 SFRP2Q96HF1 295 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 PRR25Q96S07 402 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 LENEPQ9Y5L5 61 aa9.51□□□□□ -0.89
HMGB3P4-201ENST00000428776 STAB1Q9NY15 2570 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 OR5I1Q13606 314 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 FAM231DQ6ZW35 169 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 OR10G8Q8NGN5 311 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 OSTCQ9NRP0 149 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 SMCO4Q9NRQ5 59 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 ZNF492Q9P255 531 aa9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 ZNF256Q9Y2P7 627 aaPredicted RBP9.5□□□□□ -0.89
HMGB3P4-201ENST00000428776 CXorf65A6NEN9 183 aa9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 CMC4P56277 68 aaPredicted RBP9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 HIST1H1AQ02539 215 aaPredicted RBP9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 BTN1A1Q13410 526 aa9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 IBA57Q5T440 356 aaKnown RBP9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 Q8TAT8 98 aa9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 C8orf49Q96NF6 230 aa9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 MCRIP2Q9BUT9 160 aaKnown RBP9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 TUBA4BQ9H853 241 aa9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 AGRNO00468 2067 aa9.49□□□□□ -0.89
HMGB3P4-201ENST00000428776 TRBV7-9A0A0J9YWB2 115 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 A0A0J9YX75 114 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 F6UB75 175 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 H7BYZ3 331 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 ZNF705DP0CH99 300 aaPredicted RBP9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 ZNF705BP0CI00 300 aaPredicted RBP9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 CT45A10P0DMU9 189 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 C9orf66Q5T8R8 295 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 PRR27Q6MZM9 219 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 FOXI2Q6ZQN5 318 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 DAZAP1Q96EP5 407 aaKnown RBP9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 ZC2HC1AQ96GY0 325 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 GPR61Q9BZJ8 451 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 SAV1Q9H4B6 383 aaPredicted RBP9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
HMGB3P4-201ENST00000428776 C19orf71A6NCJ1 209 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 CD33P20138 364 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 DEFB131AP59861 70 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 DEFB1P60022 68 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 SMUG1Q53HV7 270 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 TMEM88Q6PEY1 159 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 CBLN2Q8IUK8 224 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 NUDT10Q8NFP7 164 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 NUDT11Q96G61 164 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 ASCL2Q99929 193 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 RNASE7Q9H1E1 156 aaKnown RBP9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 MAP6D1Q9H9H5 199 aa9.47□□□□□ -0.89
HMGB3P4-201ENST00000428776 GATCO43716 136 aaKnown RBP9.46□□□□□ -0.9
HMGB3P4-201ENST00000428776 BEAN1Q3B7T3 259 aa9.46□□□□□ -0.9
HMGB3P4-201ENST00000428776 FAM162BQ5T6X4 162 aa9.46□□□□□ -0.9
HMGB3P4-201ENST00000428776 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.9
HMGB3P4-201ENST00000428776 ODF3Q96PU9 254 aa9.46□□□□□ -0.9
HMGB3P4-201ENST00000428776 IMMP2LQ96T52 175 aa9.46□□□□□ -0.9
HMGB3P4-201ENST00000428776 FAM110AQ9BQ89 295 aa9.46□□□□□ -0.9
HMGB3P4-201ENST00000428776 ZNF705GA8MUZ8 300 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 P01737 135 aa9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 CRISP2P16562 243 aa9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 CRIP1P50238 77 aa9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 LINC00322Q6ZN03 302 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 V9GYV3 84 aa9.45□□□□□ -0.9
HMGB3P4-201ENST00000428776 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 OR11H12B2RN74 326 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 HLA-DRB4P13762 266 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms