RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 ZNF600Q6ZNG1 722 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 BPIFA4PQ86YQ2 179 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 OR5T1Q8NG75 326 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 C4orf3Q8WVX3 66 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 FAM103A1Q9BTL3 118 aaKnown RBP6.59□□□□□ -1.35
HDAC1-202ENST00000428704 MLST8Q9BVC4 326 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 GNB4Q9HAV0 340 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 OTORQ9NRC9 128 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 IGHV3-21A0A0B4J1V1 117 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF320A2RRD8 509 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 CCL24O00175 119 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 NDUFB8O95169 186 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 IGLC2P0DOY2 106 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 AKR1D1P51857 326 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 ERVFC1-1P60608 527 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 LYZP61626 148 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 RANP62826 216 aaKnown RBP6.58□□□□□ -1.36
HDAC1-202ENST00000428704 FHL3Q13643 280 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 PDE6HQ13956 83 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 ECSCRQ19T08 205 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 BAGE2Q86Y30 109 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 NECAP1Q8NC96 275 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 RNF125Q96EQ8 232 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 FMC1Q96HJ9 113 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 GPR82Q96P67 336 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 ATG101Q9BSB4 218 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF586Q9NXT0 402 aa6.58□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF256Q9Y2P7 627 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-202ENST00000428704 TRBV19A0A075B6N1 114 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 SMIM27A0A1W2PRY6 76 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF253O75346 499 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 TCRAP04437 139 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 SLC25A5P05141 298 aaKnown RBP6.57□□□□□ -1.36
HDAC1-202ENST00000428704 CTSGP08311 255 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 RAB9AP51151 201 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 RPEL1Q2QD12 228 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 DNLZQ5SXM8 178 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 C9orf66Q5T8R8 295 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 Q9H3A6 140 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 FBXL7Q9UJT9 491 aa6.57□□□□□ -1.36
HDAC1-202ENST00000428704 SERTM2A0A1B0GWG4 89 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 IFITM10A6NMD0 228 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 LY6G6CO95867 125 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 LTAP01374 205 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 MT-ND6P03923 174 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 IL4P05112 153 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 FRMD6-AS1P0C7T7 363 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 UBE2G1P62253 170 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 OR5I1Q13606 314 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 CT83Q5H943 113 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 IBA57Q5T440 356 aaKnown RBP6.56□□□□□ -1.36
HDAC1-202ENST00000428704 UNQ5815/PRO19632Q6UWF5 114 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 TMEM183AQ8IXX5 376 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF502Q8TBZ5 544 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 GRAMD2BQ96HH9 432 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF414Q96IQ9 312 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 C12orf57Q99622 126 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 GNB1LQ9BYB4 327 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF492Q9P255 531 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 TRAPPC1Q9Y5R8 145 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 HERC1Q15751 4861 aa6.56□□□□□ -1.36
HDAC1-202ENST00000428704 TRBV7-1A0A0A6YYK4 115 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 FAM231BA6NCW3 169 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 FBLL1A6NHQ2 334 aaKnown RBP6.55□□□□□ -1.36
HDAC1-202ENST00000428704 H3BUA1 57 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 SLC17A3O00476 420 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 OR2J3O76001 311 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 RPL7P18124 248 aaKnown RBP6.55□□□□□ -1.36
HDAC1-202ENST00000428704 S100A12P80511 92 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 KIR3DS1Q14943 382 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 USF2Q15853 346 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-202ENST00000428704 Q56UQ5 140 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 WDR73Q6P4I2 378 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 SIGLEC15Q6ZMC9 328 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 NUDT10Q8NFP7 164 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 OR11H1Q8NG94 326 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 IL17DQ8TAD2 202 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 BLNKQ8WV28 456 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 LINC00479Q96M42 142 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 ZFP30Q9Y2G7 519 aa6.55□□□□□ -1.36
HDAC1-202ENST00000428704 C19orf71A6NCJ1 209 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 IZUMO1RA6ND01 250 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 FAM223BA6NKX1 122 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 GATCO43716 136 aaKnown RBP6.54□□□□□ -1.36
HDAC1-202ENST00000428704 IGLV2-11P01706 119 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 LGALS1P09382 135 aaKnown RBP6.54□□□□□ -1.36
HDAC1-202ENST00000428704 S100A2P29034 98 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 PSG9Q00887 426 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 LEMD1Q68G75 181 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 COX8CQ7Z4L0 72 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 FAM223AQ8IWN6 122 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 TMEM75Q8N9X5 138 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 OR1N2Q8NGR9 330 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 CMTM2Q8TAZ6 248 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms