RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 FUT9Q9Y231 359 aa6.56□□□□□ -1.36
RFX3-AS1-202ENST00000427722 IGKV2-40A0A087WW87 121 aaPredicted RBP6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 PLAC8L1A1L4L8 177 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 H7BYZ3 331 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 EIF3GO75821 320 aaKnown RBP eCLIP6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 IGKV2D-40P01614 121 aaPredicted RBP6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 DEFB130BP0DP73 79 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 DEFB130AP0DP74 79 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 AZU1P20160 251 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 LEPP41159 167 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 UBE2L3P68036 154 aaKnown RBP6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 ERCC8Q13216 396 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 ICAM4Q14773 271 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 FAM122CQ6P4D5 195 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 FXYD5Q96DB9 178 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 PHYHIPLQ96FC7 376 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 ODF3Q96PU9 254 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 OR51M1Q9H341 326 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 PRELID1Q9Y255 219 aa6.55□□□□□ -1.36
RFX3-AS1-202ENST00000427722 LYRM9A8MSI8 78 aa6.54□□□□□ -1.36
RFX3-AS1-202ENST00000427722 NBEAP1P0C6P0 100 aa6.54□□□□□ -1.36
RFX3-AS1-202ENST00000427722 OXA1LQ15070 435 aa6.54□□□□□ -1.36
RFX3-AS1-202ENST00000427722 KHDC3LQ587J8 217 aa6.54□□□□□ -1.36
RFX3-AS1-202ENST00000427722 RNASE8Q8TDE3 154 aaKnown RBP6.54□□□□□ -1.36
RFX3-AS1-202ENST00000427722 C20orf144Q9BQM9 153 aa6.54□□□□□ -1.36
RFX3-AS1-202ENST00000427722 TRAV12-3A0A0B4J271 114 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 C7orf71A4D174 169 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 GIPP09681 153 aaPredicted RBP6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 TAS2R45P59539 299 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 RAB2AP61019 212 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 RGS21Q2M5E4 152 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 TMEM88Q6PEY1 159 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 CCDC28AQ8IWP9 274 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 Q8TAT8 98 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 TMEM263Q8WUH6 116 aaKnown RBP6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 ZNF503Q96F45 646 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 AGPAT4-IT1Q9H0P7 198 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 HYDINQ4G0P3 5121 aa6.53□□□□□ -1.36
RFX3-AS1-202ENST00000427722 FXYD6-FXYD2A0A087WZ82 144 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 SLC25A5P05141 298 aaKnown RBP6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 P0DMU3 169 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 FAM231AP0DMU4 169 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 FAM231CP0DMU5 169 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 MED14OSP0DP75 135 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 CSN1S1P47710 185 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 RANP62826 216 aaKnown RBP6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 BTN1A1Q13410 526 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ZNF266Q14584 549 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ACOT6Q3I5F7 207 aaPredicted RBP6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 Q5BKY6 102 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 TMEM78Q5T7P6 136 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ZNF493Q6ZR52 646 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 HSD17B11Q8NBQ5 300 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 FAM210BQ96KR6 192 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 AQP10Q96PS8 301 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 VGLL1Q99990 258 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 Q9H3A6 140 aa6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 NOP10Q9NPE3 64 aaKnown RBP6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 TIMM8BQ9Y5J9 83 aaPredicted RBP6.52□□□□□ -1.37
RFX3-AS1-202ENST00000427722 KLLNB2CW77 178 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 F5H768 121 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 HMGB3O15347 200 aaKnown RBP6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 M6PRP20645 277 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 RNASE4P34096 147 aaKnown RBP6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 CD300CQ08708 224 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 OR2T35Q8NGX2 323 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ASB13Q8WXK3 278 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 HYLS1Q96M11 299 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 LINC00477Q96M19 166 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 PYGO2Q9BRQ0 406 aa6.51□□□□□ -1.37
RFX3-AS1-202ENST00000427722 A0A1W2PPV4 95 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 SNURFLB1AK76 121 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ATP5G1P05496 136 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 GPX1P07203 203 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 CRISP2P16562 243 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ATP5G3P48201 142 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 CDC34P49427 236 aaPredicted RBP6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ZNF138P52744 262 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 PRR9Q5T870 116 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ZFAND2AQ8N6M9 145 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 POM121L12Q8N7R1 296 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 INO80EQ8NBZ0 244 aaPredicted RBP6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 OR10G4Q8NGN3 311 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 OR10G9Q8NGN4 311 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 OR10G7Q8NGN6 311 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 SH3BGRL3Q9H299 93 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ZNF492Q9P255 531 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
RFX3-AS1-202ENST00000427722 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
RFX3-AS1-202ENST00000427722 RNF222A6NCQ9 220 aa6.49□□□□□ -1.37
RFX3-AS1-202ENST00000427722 CBY3A6NI87 242 aa6.49□□□□□ -1.37
RFX3-AS1-202ENST00000427722 GAGE7O76087 117 aa6.49□□□□□ -1.37
RFX3-AS1-202ENST00000427722 GAGE12FP0CL80 117 aa6.49□□□□□ -1.37
RFX3-AS1-202ENST00000427722 GAGE12GP0CL81 117 aa6.49□□□□□ -1.37
RFX3-AS1-202ENST00000427722 GAGE12IP0CL82 117 aa6.49□□□□□ -1.37
RFX3-AS1-202ENST00000427722 ARL14EPLP0DKL9 152 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms