RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 RPH3ALQ9UNE2 315 aa17.69■□□□□ 0.42
APOE-202ENST00000425718 TP53TG1Q9Y2A0 90 aa17.69■□□□□ 0.42
APOE-202ENST00000425718 ZNF705DP0CH99 300 aaPredicted RBP17.68■□□□□ 0.42
APOE-202ENST00000425718 ZNF705BP0CI00 300 aaPredicted RBP17.68■□□□□ 0.42
APOE-202ENST00000425718 RAB14P61106 215 aa17.68■□□□□ 0.42
APOE-202ENST00000425718 GOLT1AQ6ZVE7 132 aa17.68■□□□□ 0.42
APOE-202ENST00000425718 IGKV2-40A0A087WW87 121 aaPredicted RBP17.67■□□□□ 0.42
APOE-202ENST00000425718 C11orf94C9JXX5 98 aa17.67■□□□□ 0.42
APOE-202ENST00000425718 IGKV2D-40P01614 121 aaPredicted RBP17.67■□□□□ 0.42
APOE-202ENST00000425718 NMBP08949 121 aa17.67■□□□□ 0.42
APOE-202ENST00000425718 CDKN1BP46527 198 aa17.67■□□□□ 0.42
APOE-202ENST00000425718 AMTNQ6UX39 209 aa17.67■□□□□ 0.42
APOE-202ENST00000425718 SBSPONQ8IVN8 264 aa17.67■□□□□ 0.42
APOE-202ENST00000425718 ZNF138P52744 262 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 CCDC28AQ8IWP9 274 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 TMEM75Q8N9X5 138 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 RCHY1Q96PM5 261 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 TM2D3Q9BRN9 247 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 NDFIP1Q9BT67 221 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 AGPAT4-IT1Q9H0P7 198 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 ZNF492Q9P255 531 aa17.66■□□□□ 0.42
APOE-202ENST00000425718 PEX7O00628 323 aa17.65■□□□□ 0.42
APOE-202ENST00000425718 S100A9P06702 114 aaKnown RBP17.65■□□□□ 0.42
APOE-202ENST00000425718 BCL2P10415 239 aa17.65■□□□□ 0.42
APOE-202ENST00000425718 CCL20P78556 96 aa17.65■□□□□ 0.42
APOE-202ENST00000425718 C20orf144Q9BQM9 153 aa17.65■□□□□ 0.42
APOE-202ENST00000425718 VAX2Q9UIW0 290 aa17.65■□□□□ 0.42
APOE-202ENST00000425718 PDE6DO43924 150 aa17.64■□□□□ 0.41
APOE-202ENST00000425718 GNG5P63218 68 aa17.64■□□□□ 0.41
APOE-202ENST00000425718 VGLL1Q99990 258 aa17.64■□□□□ 0.41
APOE-202ENST00000425718 SLC35B3Q9H1N7 401 aa17.64■□□□□ 0.41
APOE-202ENST00000425718 INSP01308 110 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 CT45A10P0DMU9 189 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 ATP5G3P48201 142 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 MEF2BQ02080 365 aaPredicted RBP17.63■□□□□ 0.41
APOE-202ENST00000425718 ERCC8Q13216 396 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 RNF183Q96D59 192 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 IGF2BP2-AS1Q96M15 143 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 ASCL2Q99929 193 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 XCL2Q9UBD3 114 aa17.63■□□□□ 0.41
APOE-202ENST00000425718 SPRY2O43597 315 aa17.62■□□□□ 0.41
APOE-202ENST00000425718 NDUFS6O75380 124 aaKnown RBP17.62■□□□□ 0.41
APOE-202ENST00000425718 CRISP2P16562 243 aa17.62■□□□□ 0.41
APOE-202ENST00000425718 SPINK13Q1W4C9 94 aa17.62■□□□□ 0.41
APOE-202ENST00000425718 TMEM256Q8N2U0 113 aa17.62■□□□□ 0.41
APOE-202ENST00000425718 FMC1Q96HJ9 113 aa17.62■□□□□ 0.41
APOE-202ENST00000425718 GOLT1BQ9Y3E0 138 aa17.62■□□□□ 0.41
APOE-202ENST00000425718 AKR1C3P42330 323 aa17.61■□□□□ 0.41
APOE-202ENST00000425718 UBE2G1P62253 170 aa17.61■□□□□ 0.41
APOE-202ENST00000425718 DEFB135Q30KP9 77 aa17.61■□□□□ 0.41
APOE-202ENST00000425718 PRKDCP78527 4128 aaKnown RBP17.61■□□□□ 0.41
APOE-202ENST00000425718 M0R2Z0 102 aa17.6■□□□□ 0.41
APOE-202ENST00000425718 GIG44P09565 113 aaPredicted RBP17.6■□□□□ 0.41
APOE-202ENST00000425718 FLI1Q01543 452 aaPredicted RBP17.6■□□□□ 0.41
APOE-202ENST00000425718 SAPCD1Q5SSQ6 148 aa17.6■□□□□ 0.41
APOE-202ENST00000425718 FAM19A4Q96LR4 140 aa17.6■□□□□ 0.41
APOE-202ENST00000425718 LOC102723971A0A1B0GUV8 181 aa17.59■□□□□ 0.41
APOE-202ENST00000425718 RBFOX3A6NFN3 312 aa17.59■□□□□ 0.41
APOE-202ENST00000425718 GPX1P07203 203 aa17.59■□□□□ 0.41
APOE-202ENST00000425718 FXYD7P58549 80 aa17.59■□□□□ 0.41
APOE-202ENST00000425718 PSG8Q9UQ74 426 aa17.59■□□□□ 0.41
APOE-202ENST00000425718 TRBV6-1A0A0K0K1D8 114 aa17.58■□□□□ 0.4
APOE-202ENST00000425718 C11orf52Q96A22 123 aa17.58■□□□□ 0.4
APOE-202ENST00000425718 ZFP30Q9Y2G7 519 aa17.58■□□□□ 0.4
APOE-202ENST00000425718 KLF12Q9Y4X4 402 aa17.58■□□□□ 0.4
APOE-202ENST00000425718 KLLNB2CW77 178 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 PRB4P10163 310 aaPredicted RBP17.57■□□□□ 0.4
APOE-202ENST00000425718 TMEM183BQ1AE95 376 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 ZNF506Q5JVG8 444 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 CSNK1G2-AS1Q8NCQ2 148 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 FAM210AQ96ND0 272 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 NIPSNAP3BQ9BS92 247 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 TMEM208Q9BTX3 173 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 TREM1Q9NP99 234 aa17.57■□□□□ 0.4
APOE-202ENST00000425718 C7orf71A4D174 169 aa17.56■□□□□ 0.4
APOE-202ENST00000425718 SMIM9A6NGZ8 99 aa17.56■□□□□ 0.4
APOE-202ENST00000425718 Q8TAT8 98 aa17.56■□□□□ 0.4
APOE-202ENST00000425718 OVOL2Q9BRP0 275 aa17.56■□□□□ 0.4
APOE-202ENST00000425718 EIF5A2Q9GZV4 153 aaKnown RBP17.56■□□□□ 0.4
APOE-202ENST00000425718 TRAV8-1A0A0A6YYK1 113 aa17.55■□□□□ 0.4
APOE-202ENST00000425718 SCO2A0A1W2PP80 73 aa17.55■□□□□ 0.4
APOE-202ENST00000425718 CRXO43186 299 aaPredicted RBP17.55■□□□□ 0.4
APOE-202ENST00000425718 PRNTQ86SH4 94 aa17.55■□□□□ 0.4
APOE-202ENST00000425718 C2CD4CQ8TF44 421 aa17.55■□□□□ 0.4
APOE-202ENST00000425718 NEU1Q99519 415 aa17.55■□□□□ 0.4
APOE-202ENST00000425718 RARRES2Q99969 163 aa17.55■□□□□ 0.4
APOE-202ENST00000425718 SMDT1Q9H4I9 107 aa17.55■□□□□ 0.4
APOE-202ENST00000425718 TMEM250H0YL14 139 aa17.54■□□□□ 0.4
APOE-202ENST00000425718 TAS2R60P59551 318 aa17.54■□□□□ 0.4
APOE-202ENST00000425718 CLLU1Q5K131 121 aa17.54■□□□□ 0.4
APOE-202ENST00000425718 ZNF705AQ6ZN79 300 aaPredicted RBP17.54■□□□□ 0.4
APOE-202ENST00000425718 ZFAND2AQ8N6M9 145 aa17.54■□□□□ 0.4
APOE-202ENST00000425718 OR11H2Q8NH07 326 aa17.54■□□□□ 0.4
APOE-202ENST00000425718 TRAV12-2A0A075B6T6 113 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 H7BYZ3 331 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 IGLV2-11P01706 119 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 MIFP14174 115 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 IFITM2Q01629 132 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 SMUG1Q53HV7 270 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 TOR2AQ5JU69 321 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms