RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
CHCHD3-202ENST00000423635 OR10P1Q8NGE3 313 aa11.18□□□□□ -0.62
CHCHD3-202ENST00000423635 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
CHCHD3-202ENST00000423635 SOSTQ9BQB4 213 aa11.18□□□□□ -0.62
CHCHD3-202ENST00000423635 CCDC59Q9P031 241 aaKnown RBP11.18□□□□□ -0.62
CHCHD3-202ENST00000423635 MGAT4CQ9UBM8 478 aa11.18□□□□□ -0.62
CHCHD3-202ENST00000423635 TP53TG3Q9ULZ0 132 aa11.18□□□□□ -0.62
CHCHD3-202ENST00000423635 E5RGE8 158 aa11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 NMBP08949 121 aa11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 OR4E1P0C645 316 aa11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 METTL15P1P0C7V9 234 aa11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 CRISP2P16562 243 aa11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 C10orf113Q5VZT2 155 aa11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 SLC25A21Q9BQT8 299 aaPredicted RBP11.17□□□□□ -0.62
CHCHD3-202ENST00000423635 TRGV4A0A0C4DH28 118 aa11.16□□□□□ -0.62
CHCHD3-202ENST00000423635 ORM1P02763 201 aa11.16□□□□□ -0.62
CHCHD3-202ENST00000423635 FAUP35544 74 aaKnown RBP11.16□□□□□ -0.62
CHCHD3-202ENST00000423635 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
CHCHD3-202ENST00000423635 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
CHCHD3-202ENST00000423635 DNAJC4Q9NNZ3 241 aa11.16□□□□□ -0.62
CHCHD3-202ENST00000423635 PLA2G2DQ9UNK4 145 aa11.16□□□□□ -0.62
CHCHD3-202ENST00000423635 IBA57-AS1B1ANH7 110 aa11.15□□□□□ -0.62
CHCHD3-202ENST00000423635 RGS13O14921 159 aa11.15□□□□□ -0.62
CHCHD3-202ENST00000423635 SSSCA1O60232 199 aa11.15□□□□□ -0.62
CHCHD3-202ENST00000423635 OXTP01178 125 aa11.15□□□□□ -0.62
CHCHD3-202ENST00000423635 GPX1P07203 203 aa11.15□□□□□ -0.62
CHCHD3-202ENST00000423635 GYPEP15421 78 aa11.15□□□□□ -0.62
CHCHD3-202ENST00000423635 RCL1Q9Y2P8 373 aaKnown RBP11.15□□□□□ -0.62
CHCHD3-202ENST00000423635 IGHV1OR15-1A0A075B7D0 117 aa11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 TRAV5A0A0B4J249 113 aa11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 M0R3E3 92 aa11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 SPCS2Q15005 226 aa11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 PCNPQ8WW12 178 aaKnown RBP11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 MGST2Q99735 147 aa11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 TXNDC17Q9BRA2 123 aa11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
CHCHD3-202ENST00000423635 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 TIRAPP58753 221 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 TAS2R30P59541 319 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 ARL16Q0P5N6 197 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 LINC01556Q5JQF7 62 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 Q6ZQT7 251 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 C9orf47Q6ZRZ4 202 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 ZFAND2AQ8N6M9 145 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 OR10G4Q8NGN3 311 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 ZNF479Q96JC4 524 aa11.13□□□□□ -0.63
CHCHD3-202ENST00000423635 TRBV19A0A075B6N1 114 aa11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 FABP12A6NFH5 140 aa11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 TSC22D2O75157 780 aa11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 SFTA3P0C7M3 94 aa11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 Q6ZRG5 221 aa11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 RASL10AQ92737 203 aa11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 ARPC5LQ9BPX5 153 aa11.12□□□□□ -0.63
CHCHD3-202ENST00000423635 NDUFB4O95168 129 aa11.11□□□□□ -0.63
CHCHD3-202ENST00000423635 AP3S2P59780 193 aa11.11□□□□□ -0.63
CHCHD3-202ENST00000423635 UBE2MP61081 183 aaKnown RBP11.11□□□□□ -0.63
CHCHD3-202ENST00000423635 PRR9Q5T870 116 aa11.11□□□□□ -0.63
CHCHD3-202ENST00000423635 SH2D6Q7Z4S9 175 aa11.11□□□□□ -0.63
CHCHD3-202ENST00000423635 TRIM63Q969Q1 353 aa11.11□□□□□ -0.63
CHCHD3-202ENST00000423635 C9orf170A2RU37 121 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 C9JCJ5 164 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 TNFSF8P32971 234 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 TOMM5Q8N4H5 51 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 OR1L4Q8NGR5 311 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 MCFD2Q8NI22 146 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 DYNC2LI1Q8TCX1 351 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 RAB2BQ8WUD1 216 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 DEDD2Q8WXF8 326 aa11.1□□□□□ -0.63
CHCHD3-202ENST00000423635 SMIM18P0DKX4 95 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 CAMLGP49069 296 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 PDE6HQ13956 83 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 SRRQ9GZT4 340 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 TMEM14CQ9P0S9 112 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 HIST1H1EP10412 219 aaKnown RBP11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 RAB31Q13636 194 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 TMEM78Q5T7P6 136 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 NRARPQ7Z6K4 114 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 C12orf45Q8N5I9 185 aaPredicted RBP11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 PFDN5Q99471 154 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 SPXQ9BT56 116 aa11.09□□□□□ -0.63
CHCHD3-202ENST00000423635 TRBV7-9A0A0J9YWB2 115 aa11.08□□□□□ -0.64
CHCHD3-202ENST00000423635 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
CHCHD3-202ENST00000423635 EXOC3-AS1Q8N2X6 119 aa11.08□□□□□ -0.64
CHCHD3-202ENST00000423635 SLC25A31Q9H0C2 315 aa11.08□□□□□ -0.64
CHCHD3-202ENST00000423635 Q9HAA7 133 aa11.08□□□□□ -0.64
CHCHD3-202ENST00000423635 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
CHCHD3-202ENST00000423635 C7orf66A4D0T2 115 aa11.07□□□□□ -0.64
CHCHD3-202ENST00000423635 WFDC2Q14508 124 aa11.07□□□□□ -0.64
CHCHD3-202ENST00000423635 TDRG1Q3Y452 100 aa11.07□□□□□ -0.64
CHCHD3-202ENST00000423635 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 SCGB1D2O95969 90 aa11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms