RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TEX48A0A1B0GUV7 120 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 A0A1W2PPV4 95 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 KANTRA0A1W2PQU2 76 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 ZNF705GA8MUZ8 300 aaPredicted RBP10.79□□□□□ -0.68
USB1-202ENST00000423271 BOLA2-SMG1P6H3BVE0 249 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 HMGB3O15347 200 aaKnown RBP10.79□□□□□ -0.68
USB1-202ENST00000423271 ZNF253O75346 499 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 MBP02144 154 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 HTN3P15516 51 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 CDC34P49427 236 aaPredicted RBP10.79□□□□□ -0.68
USB1-202ENST00000423271 TAS2R45P59539 299 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 RNF141Q8WVD5 230 aa10.79□□□□□ -0.68
USB1-202ENST00000423271 RPUSD4Q96CM3 377 aaKnown RBP10.79□□□□□ -0.68
USB1-202ENST00000423271 ZNF471Q9BX82 626 aaPredicted RBP10.79□□□□□ -0.68
USB1-202ENST00000423271 PFDN1O60925 122 aa10.78□□□□□ -0.68
USB1-202ENST00000423271 NBEAP1P0C6P0 100 aa10.78□□□□□ -0.68
USB1-202ENST00000423271 UBE2L3P68036 154 aaKnown RBP10.78□□□□□ -0.68
USB1-202ENST00000423271 PDE6HQ13956 83 aa10.78□□□□□ -0.68
USB1-202ENST00000423271 LGALSLQ3ZCW2 172 aaPredicted RBP10.78□□□□□ -0.68
USB1-202ENST00000423271 PHYHIPLQ96FC7 376 aa10.78□□□□□ -0.68
USB1-202ENST00000423271 PRAC2D3DTV9 90 aa10.77□□□□□ -0.69
USB1-202ENST00000423271 P0DMU3 169 aa10.77□□□□□ -0.69
USB1-202ENST00000423271 FAM231AP0DMU4 169 aa10.77□□□□□ -0.69
USB1-202ENST00000423271 FAM231CP0DMU5 169 aa10.77□□□□□ -0.69
USB1-202ENST00000423271 SSX7Q7RTT5 188 aa10.77□□□□□ -0.69
USB1-202ENST00000423271 POM121L12Q8N7R1 296 aa10.77□□□□□ -0.69
USB1-202ENST00000423271 RAB24Q969Q5 203 aa10.77□□□□□ -0.69
USB1-202ENST00000423271 M0R3E3 92 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 STAG3L2P0CL84 134 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 STAG3L3P0CL85 134 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 AZU1P20160 251 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 DAD1P61803 113 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 AKR1C8PQ5T2L2 129 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 PQLC2Q6ZP29 291 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 HYLS1Q96M11 299 aa10.76□□□□□ -0.69
USB1-202ENST00000423271 ACTR3CQ9C0K3 210 aaPredicted RBP10.76□□□□□ -0.69
USB1-202ENST00000423271 PLAC8L1A1L4L8 177 aa10.75□□□□□ -0.69
USB1-202ENST00000423271 ARL14EPLP0DKL9 152 aa10.75□□□□□ -0.69
USB1-202ENST00000423271 ICAM4Q14773 271 aa10.75□□□□□ -0.69
USB1-202ENST00000423271 ZNF726P1Q15940 193 aa10.75□□□□□ -0.69
USB1-202ENST00000423271 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
USB1-202ENST00000423271 PPP1R14DQ9NXH3 145 aa10.75□□□□□ -0.69
USB1-202ENST00000423271 PKD1P98161 4303 aa10.75□□□□□ -0.69
USB1-202ENST00000423271 RANP62826 216 aaKnown RBP10.74□□□□□ -0.69
USB1-202ENST00000423271 KIR3DS1Q14943 382 aa10.74□□□□□ -0.69
USB1-202ENST00000423271 ZFP69Q49AA0 526 aa10.74□□□□□ -0.69
USB1-202ENST00000423271 TMEM88Q6PEY1 159 aa10.74□□□□□ -0.69
USB1-202ENST00000423271 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
USB1-202ENST00000423271 FAM210BQ96KR6 192 aa10.74□□□□□ -0.69
USB1-202ENST00000423271 LINC01587Q99440 93 aa10.74□□□□□ -0.69
USB1-202ENST00000423271 PRELID1Q9Y255 219 aa10.74□□□□□ -0.69
USB1-202ENST00000423271 CTXND1A0A1B0GTU2 59 aa10.73□□□□□ -0.69
USB1-202ENST00000423271 LYRM9A8MSI8 78 aa10.73□□□□□ -0.69
USB1-202ENST00000423271 SEC11BP0C7V7 166 aa10.73□□□□□ -0.69
USB1-202ENST00000423271 TSPOP30536 169 aa10.73□□□□□ -0.69
USB1-202ENST00000423271 EIF5AP63241 154 aaKnown RBP10.73□□□□□ -0.69
USB1-202ENST00000423271 C9orf62Q8N4C0 152 aa10.73□□□□□ -0.69
USB1-202ENST00000423271 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
USB1-202ENST00000423271 Q9H3A6 140 aa10.73□□□□□ -0.69
USB1-202ENST00000423271 M0R2N4 97 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 DEFB130BP0DP73 79 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 DEFB130AP0DP74 79 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 TPT1P13693 172 aaKnown RBP10.72□□□□□ -0.69
USB1-202ENST00000423271 HTN1P15515 57 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 GCHFRP30047 84 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 CDKN1BP46527 198 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 UBE2DNLQ8IWF7 75 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 STOML3Q8TAV4 291 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 NACAE9PAV3 2078 aa10.72□□□□□ -0.69
USB1-202ENST00000423271 NPIPB6E9PJ23 425 aa10.71□□□□□ -0.69
USB1-202ENST00000423271 CXorf1O96002 111 aa10.71□□□□□ -0.69
USB1-202ENST00000423271 TAS2R60P59551 318 aa10.71□□□□□ -0.69
USB1-202ENST00000423271 ERCC8Q13216 396 aa10.71□□□□□ -0.69
USB1-202ENST00000423271 TMEM256Q8N2U0 113 aa10.71□□□□□ -0.69
USB1-202ENST00000423271 SUN5Q8TC36 379 aa10.71□□□□□ -0.69
USB1-202ENST00000423271 TMED6Q8WW62 240 aa10.71□□□□□ -0.69
USB1-202ENST00000423271 IGLV2-18A0A075B6J9 118 aa10.7□□□□□ -0.7
USB1-202ENST00000423271 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
USB1-202ENST00000423271 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
USB1-202ENST00000423271 FHITP49789 147 aa10.7□□□□□ -0.7
USB1-202ENST00000423271 NKX2-5P52952 324 aaPredicted RBP10.7□□□□□ -0.7
USB1-202ENST00000423271 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
USB1-202ENST00000423271 GFI1BQ5VTD9 330 aa10.7□□□□□ -0.7
USB1-202ENST00000423271 IQCF2Q8IXL9 164 aa10.7□□□□□ -0.7
USB1-202ENST00000423271 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
USB1-202ENST00000423271 MAP1LC3B2A6NCE7 125 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 PGPA6NDG6 321 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 UMAD1C9J7I0 102 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 J3KRW8 73 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 CT45A10P0DMU9 189 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 SLC51BQ86UW2 128 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 FAM213BQ8TBF2 198 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 RNASE8Q8TDE3 154 aaKnown RBP10.69□□□□□ -0.7
USB1-202ENST00000423271 C16orf74Q96GX8 76 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 MAP1LC3BQ9GZQ8 125 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 AGPAT4-IT1Q9H0P7 198 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 TMPRSS5Q9H3S3 457 aa10.69□□□□□ -0.7
USB1-202ENST00000423271 TMEM167BQ9NRX6 74 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms