RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 TMEM78Q5T7P6 136 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 C9orf47Q6ZRZ4 202 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 OR11H4Q8NGC9 324 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 AGPAT4-IT1Q9H0P7 198 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 OTORQ9NRC9 128 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 TEX48A0A1B0GUV7 120 aa13.06□□□□□ -0.32
ECHDC3-202ENST00000420401 C11orf94C9JXX5 98 aa13.06□□□□□ -0.32
ECHDC3-202ENST00000420401 SPART-AS1P0CW21 52 aa13.06□□□□□ -0.32
ECHDC3-202ENST00000420401 ARL14EPLP0DKL9 152 aa13.06□□□□□ -0.32
ECHDC3-202ENST00000420401 TAS2R60P59551 318 aa13.06□□□□□ -0.32
ECHDC3-202ENST00000420401 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
ECHDC3-202ENST00000420401 CMTM2Q8TAZ6 248 aa13.06□□□□□ -0.32
ECHDC3-202ENST00000420401 IGKV2-40A0A087WW87 121 aaPredicted RBP13.05□□□□□ -0.32
ECHDC3-202ENST00000420401 KANTRA0A1W2PQU2 76 aa13.05□□□□□ -0.32
ECHDC3-202ENST00000420401 ZNF705GA8MUZ8 300 aaPredicted RBP13.05□□□□□ -0.32
ECHDC3-202ENST00000420401 H7BYZ3 331 aa13.05□□□□□ -0.32
ECHDC3-202ENST00000420401 CXorf1O96002 111 aa13.05□□□□□ -0.32
ECHDC3-202ENST00000420401 IGKV2D-40P01614 121 aaPredicted RBP13.05□□□□□ -0.32
ECHDC3-202ENST00000420401 GFI1BQ5VTD9 330 aa13.05□□□□□ -0.32
ECHDC3-202ENST00000420401 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 PGPA6NDG6 321 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 J3KRW8 73 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 SLC25A5P05141 298 aaKnown RBP13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 GCHFRP30047 84 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 ST6GAL2Q96JF0 529 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 HYLS1Q96M11 299 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 VGLL1Q99990 258 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 TMEM167BQ9NRX6 74 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 CELA1Q9UNI1 258 aa13.04□□□□□ -0.32
ECHDC3-202ENST00000420401 DIRC3C9JPN6 131 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 BCL2L11O43521 198 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 NMBP08949 121 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 HTN1P15515 57 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 ZNF138P52744 262 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 KIR3DS1Q14943 382 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 C12orf74Q32Q52 190 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 ARL6IP6Q8N6S5 226 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 SUN5Q8TC36 379 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 FAM19A4Q96LR4 140 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 NIPSNAP3BQ9BS92 247 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 ZNF492Q9P255 531 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 DKK2Q9UBU2 259 aa13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 YTHDF2Q9Y5A9 579 aaKnown RBP13.03□□□□□ -0.32
ECHDC3-202ENST00000420401 TRAV10A0A0B4J240 114 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 TRAV12-3A0A0B4J271 114 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 CTXND1A0A1B0GTU2 59 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 PFDN1O60925 122 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 CRISP2P16562 243 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 EIF5AP63241 154 aaKnown RBP13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 FAM222AQ5U5X8 452 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 Q6ZTC4 211 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 C2CD4CQ8TF44 421 aa13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 ZNF471Q9BX82 626 aaPredicted RBP13.02□□□□□ -0.33
ECHDC3-202ENST00000420401 C7orf71A4D174 169 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 KLLNB2CW77 178 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 PRM2P04554 102 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 GPX1P07203 203 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 ZNF767PQ75MW2 155 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 IQCF2Q8IXL9 164 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 C16orf74Q96GX8 76 aa13.01□□□□□ -0.33
ECHDC3-202ENST00000420401 HERC2O95714 4834 aa13□□□□□ -0.33
ECHDC3-202ENST00000420401 AZU1P20160 251 aa13□□□□□ -0.33
ECHDC3-202ENST00000420401 RNASE4P34096 147 aaKnown RBP13□□□□□ -0.33
ECHDC3-202ENST00000420401 SSX7Q7RTT5 188 aa13□□□□□ -0.33
ECHDC3-202ENST00000420401 PYGO2Q9BRQ0 406 aa13□□□□□ -0.33
ECHDC3-202ENST00000420401 RPH3ALQ9UNE2 315 aa13□□□□□ -0.33
ECHDC3-202ENST00000420401 SEC11BP0C7V7 166 aa12.99□□□□□ -0.33
ECHDC3-202ENST00000420401 ZNF726P1Q15940 193 aa12.99□□□□□ -0.33
ECHDC3-202ENST00000420401 TMEM263Q8WUH6 116 aaKnown RBP12.99□□□□□ -0.33
ECHDC3-202ENST00000420401 TMED6Q8WW62 240 aa12.99□□□□□ -0.33
ECHDC3-202ENST00000420401 hCG_2014768A0A024R1R8 64 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 DEFB131BA0A096LNP1 70 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 LYRM9A8MSI8 78 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 TCTAP57738 103 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 CD300CQ08708 224 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 BTN1A1Q13410 526 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 GOLT1AQ6ZVE7 132 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 AKAP14Q86UN6 197 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 Q8TAT8 98 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 LENEPQ9Y5L5 61 aa12.98□□□□□ -0.33
ECHDC3-202ENST00000420401 SERTM2A0A1B0GWG4 89 aa12.97□□□□□ -0.33
ECHDC3-202ENST00000420401 A0A1W2PRE2 83 aa12.97□□□□□ -0.33
ECHDC3-202ENST00000420401 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
ECHDC3-202ENST00000420401 DAD1P61803 113 aa12.97□□□□□ -0.33
ECHDC3-202ENST00000420401 C5orf17Q8NAS9 161 aa12.97□□□□□ -0.33
ECHDC3-202ENST00000420401 STOML3Q8TAV4 291 aa12.97□□□□□ -0.33
ECHDC3-202ENST00000420401 PCLOQ9Y6V0 5065 aa12.96□□□□□ -0.33
ECHDC3-202ENST00000420401 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.33
ECHDC3-202ENST00000420401 MAP1LC3B2A6NCE7 125 aa12.96□□□□□ -0.33
ECHDC3-202ENST00000420401 IGLL5B9A064 214 aa12.96□□□□□ -0.33
ECHDC3-202ENST00000420401 K7EQM0 130 aa12.96□□□□□ -0.33
ECHDC3-202ENST00000420401 C1QBP02746 253 aa12.96□□□□□ -0.33
ECHDC3-202ENST00000420401 TPT1P13693 172 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms