RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 CBY3A6NI87 242 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 ATP5G1P05496 136 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 ATP5G3P48201 142 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
NOD1-204ENST00000419601 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 LYPD1Q8N2G4 141 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 ZNF503Q96F45 646 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 PHYHIPLQ96FC7 376 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
NOD1-204ENST00000419601 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
NOD1-204ENST00000419601 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
NOD1-204ENST00000419601 C7orf71A4D174 169 aa11.22□□□□□ -0.61
NOD1-204ENST00000419601 KLLNB2CW77 178 aa11.22□□□□□ -0.61
NOD1-204ENST00000419601 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
NOD1-204ENST00000419601 NMBP08949 121 aa11.22□□□□□ -0.61
NOD1-204ENST00000419601 ACOT6Q3I5F7 207 aaPredicted RBP11.22□□□□□ -0.61
NOD1-204ENST00000419601 UBE2DNLQ8IWF7 75 aa11.22□□□□□ -0.61
NOD1-204ENST00000419601 SNURFLB1AK76 121 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 F5H768 121 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 GPX1P07203 203 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 CRISP2P16562 243 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 M6PRP20645 277 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 CSN1S1P47710 185 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 RANP62826 216 aaKnown RBP11.21□□□□□ -0.61
NOD1-204ENST00000419601 ASB13Q8WXK3 278 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 VGLL1Q99990 258 aa11.21□□□□□ -0.61
NOD1-204ENST00000419601 DNAH6Q9C0G6 4158 aa11.21□□□□□ -0.62
NOD1-204ENST00000419601 DNAH10Q8IVF4 4471 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 GIPP09681 153 aaPredicted RBP11.2□□□□□ -0.62
NOD1-204ENST00000419601 RNASE4P34096 147 aaKnown RBP11.2□□□□□ -0.62
NOD1-204ENST00000419601 CD300CQ08708 224 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 BTN1A1Q13410 526 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 ZNF266Q14584 549 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 RNF212Q495C1 297 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 Q9H3A6 140 aa11.2□□□□□ -0.62
NOD1-204ENST00000419601 RBAKDNA6NC62 111 aa11.19□□□□□ -0.62
NOD1-204ENST00000419601 ZNF324O75467 553 aaPredicted RBP11.19□□□□□ -0.62
NOD1-204ENST00000419601 ZNF138P52744 262 aa11.19□□□□□ -0.62
NOD1-204ENST00000419601 LINC00612Q8N6U2 182 aa11.19□□□□□ -0.62
NOD1-204ENST00000419601 ZNF680Q8NEM1 530 aa11.19□□□□□ -0.62
NOD1-204ENST00000419601 ZNF492Q9P255 531 aa11.19□□□□□ -0.62
NOD1-204ENST00000419601 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
NOD1-204ENST00000419601 RAB2AP61019 212 aa11.18□□□□□ -0.62
NOD1-204ENST00000419601 DAZ2Q13117 558 aaKnown RBP11.18□□□□□ -0.62
NOD1-204ENST00000419601 PQLC2Q6ZP29 291 aa11.18□□□□□ -0.62
NOD1-204ENST00000419601 EIF4E3Q8N5X7 224 aaKnown RBP11.18□□□□□ -0.62
NOD1-204ENST00000419601 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
NOD1-204ENST00000419601 OR10G4Q8NGN3 311 aa11.18□□□□□ -0.62
NOD1-204ENST00000419601 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
NOD1-204ENST00000419601 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
NOD1-204ENST00000419601 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
NOD1-204ENST00000419601 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
NOD1-204ENST00000419601 HSD17B11Q8NBQ5 300 aa11.17□□□□□ -0.62
NOD1-204ENST00000419601 OR2G3Q8NGZ4 309 aa11.17□□□□□ -0.62
NOD1-204ENST00000419601 RXFP4Q8TDU9 374 aa11.17□□□□□ -0.62
NOD1-204ENST00000419601 PSMG3Q9BT73 122 aaPredicted RBP11.17□□□□□ -0.62
NOD1-204ENST00000419601 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
NOD1-204ENST00000419601 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 EIF3GO75821 320 aaKnown RBP eCLIP11.16□□□□□ -0.62
NOD1-204ENST00000419601 GAGE7O76087 117 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 Q5BKY6 102 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 FAM74A1Q5RGS3 127 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 PRR9Q5T870 116 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
NOD1-204ENST00000419601 Q8TAT8 98 aa11.16□□□□□ -0.62
NOD1-204ENST00000419601 DIRC3C9JPN6 131 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 RGS13O14921 159 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 NUDT3O95989 172 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.62
NOD1-204ENST00000419601 LGALS9BQ3B8N2 356 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 C11orf72Q8NBR9 251 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 CMTM2Q8TAZ6 248 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 HYLS1Q96M11 299 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 ATG101Q9BSB4 218 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 GSN-AS1Q9NRJ2 163 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
NOD1-204ENST00000419601 IGHV1OR15-1A0A075B7D0 117 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 PGPA6NDG6 321 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 M0R2N4 97 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 MBP02144 154 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 ATP6V0CP27449 155 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 CDC34P49427 236 aaPredicted RBP11.14□□□□□ -0.63
NOD1-204ENST00000419601 SERF2P84101 59 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 OR5I1Q13606 314 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 IBA57Q5T440 356 aaKnown RBP11.14□□□□□ -0.63
NOD1-204ENST00000419601 Q6ZTI0 123 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 LINC00336Q6ZUF6 198 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
NOD1-204ENST00000419601 PCLOQ9Y6V0 5065 aa11.13□□□□□ -0.63
NOD1-204ENST00000419601 FXYD6-FXYD2A0A087WZ82 144 aa11.13□□□□□ -0.63
NOD1-204ENST00000419601 HMGB3O15347 200 aaKnown RBP11.13□□□□□ -0.63
NOD1-204ENST00000419601 ARL14EPLP0DKL9 152 aa11.13□□□□□ -0.63
NOD1-204ENST00000419601 TCL1AP56279 114 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms