RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 GNB1LQ9BYB4 327 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 OR2D2Q9H210 308 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 TXNIPQ9H3M7 391 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 TP73-AS1Q9UF72 201 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 DYSFO75923 2080 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 CENPVL3A0A0U1RRI6 287 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 FAM24AA6NFZ4 105 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF878C9JN71 531 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 ISG15P05161 165 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 FABP2P12104 132 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 HIST1H1DP16402 221 aaKnown RBP3.71□□□□□ -1.82
VPS13A-207ENST00000419472 QRFPP83859 136 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 KLRD1Q13241 179 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 EBLN2Q6P2I7 272 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 FMC1Q96HJ9 113 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 HES4Q9HCC6 221 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 RPRMQ9NS64 109 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 ADGRG4Q8IZF6 3080 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 A0A1W2PNU3 283 aaPredicted RBP3.71□□□□□ -1.82
VPS13A-207ENST00000419472 A0A1W2PRE2 83 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 C2orf70A6NJV1 201 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 SOCS1O15524 211 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 IGKV3-11P04433 115 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 FREM3P0C091 2139 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 HIST1H1EP10412 219 aaKnown RBP3.71□□□□□ -1.82
VPS13A-207ENST00000419472 UBE2G1P62253 170 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 CATR1Q13166 79 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 C6orf99Q4VX62 202 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 Q56UQ5 140 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 FAM162BQ5T6X4 162 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 LINC01590Q5TEZ4 76 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 C2orf91Q6ZV80 131 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 OR51T1Q8NGJ9 327 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 OR5C1Q8NGR4 320 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 C7orf33Q8WU49 177 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 ULBP3Q9BZM4 244 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 ACACAQ13085 2346 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 DOPEY2Q9Y3R5 2298 aa3.71□□□□□ -1.82
VPS13A-207ENST00000419472 IGKV1-27A0A075B6S5 117 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 IGKV3D-11A0A0A0MRZ8 115 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 A0A1B0GXF2 115 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 SRRM5B3KS81 715 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 F5H5K5 113 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 KRTAP4-16G5E9R7 235 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-207ENST00000419472 H3BP45 60 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 ALOX5APP20292 161 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 PSMB3P49720 205 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 DYNLT3P51808 116 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 IGLV3-21P80748 117 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM78Q5T7P6 136 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 Q6ZUT4 128 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 FAM231DQ6ZW35 169 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF439Q8NDP4 499 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 MED29Q9NX70 200 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 TLN1Q9Y490 2541 aaKnown RBP3.7□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF407Q9C0G0 2248 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 IGKV1D-42A0A075B6H8 117 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 ISLRO14498 428 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 NDUFS5O43920 106 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 MT-ND6P03923 174 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF141Q15928 474 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-207ENST00000419472 ABHD14BQ96IU4 210 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 VGLL1Q99990 258 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 PECRQ9BY49 303 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM126AQ9H061 195 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 TAS2R4Q9NYW5 299 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 PTPRQQ9UMZ3 2332 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 MED13Q9UHV7 2174 aa3.7□□□□□ -1.82
VPS13A-207ENST00000419472 OR4C46A6NHA9 309 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 CCDC179H3BU77 68 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 RER1O15258 196 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 ZG16O60844 167 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 NDUFB2O95178 105 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 TRBV12-3P01733 135 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 WFDC2Q14508 124 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 PMVKQ15126 192 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 OR8B8Q15620 311 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 KRTAP21-3Q3LHN1 58 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 Q6AWC8 147 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 ZFAND6Q6FIF0 208 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 LYZL2Q7Z4W2 148 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 FAM19A5Q7Z5A7 132 aaPredicted RBP3.69□□□□□ -1.82
VPS13A-207ENST00000419472 FAM19A2Q8N3H0 131 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 OR10G9Q8NGN4 311 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 LSM10Q969L4 123 aaKnown RBP3.69□□□□□ -1.82
VPS13A-207ENST00000419472 IL36BQ9NZH7 164 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 EML6Q6ZMW3 1958 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 APC2O95996 2303 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 J3QKU1 62 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 COX8AP10176 69 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 NPPCP23582 126 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 SERF2P84101 59 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF90Q03938 601 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 RPL18Q07020 188 aaKnown RBP3.69□□□□□ -1.82
VPS13A-207ENST00000419472 DNAJC30Q96LL9 226 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 NAA38Q9BRA0 125 aaKnown RBP3.69□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM243Q9BU79 118 aa3.69□□□□□ -1.82
VPS13A-207ENST00000419472 TMEM70Q9BUB7 260 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms