RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 C20orf144Q9BQM9 153 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 TMEM208Q9BTX3 173 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 HBE1P02100 147 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 CD300CQ08708 224 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 CMTM2Q8TAZ6 248 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 VGLL1Q99990 258 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
EPCAM-203ENST00000419334 KIR3DS1Q14943 382 aa12.71□□□□□ -0.37
EPCAM-203ENST00000419334 GFI1BQ5VTD9 330 aa12.71□□□□□ -0.37
EPCAM-203ENST00000419334 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.37
EPCAM-203ENST00000419334 TMEM189A5PLL7 270 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 MAP1LC3B2A6NCE7 125 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 CRISP2P16562 243 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 ZFP69Q49AA0 526 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 IQCF2Q8IXL9 164 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 C11orf45Q8TAV5 145 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 ZNF492Q9P255 531 aa12.7□□□□□ -0.38
EPCAM-203ENST00000419334 TRBV7-9A0A0J9YWB2 115 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 A0A1W2PRE2 83 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 KLLNB2CW77 178 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 NMBP08949 121 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 FHITP49789 147 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 ZNF138P52744 262 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 FGF8P55075 233 aaPredicted RBP12.69□□□□□ -0.38
EPCAM-203ENST00000419334 DPPA3Q6W0C5 159 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 C9orf62Q8N4C0 152 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 LINC01587Q99440 93 aa12.69□□□□□ -0.38
EPCAM-203ENST00000419334 LOC102723971A0A1B0GUV8 181 aa12.68□□□□□ -0.38
EPCAM-203ENST00000419334 H7BYZ3 331 aa12.68□□□□□ -0.38
EPCAM-203ENST00000419334 J3KRW8 73 aa12.68□□□□□ -0.38
EPCAM-203ENST00000419334 TAS2R60P59551 318 aa12.68□□□□□ -0.38
EPCAM-203ENST00000419334 EIF5AL1Q6IS14 154 aaKnown RBP12.68□□□□□ -0.38
EPCAM-203ENST00000419334 SLC51BQ86UW2 128 aa12.68□□□□□ -0.38
EPCAM-203ENST00000419334 C5orf17Q8NAS9 161 aa12.68□□□□□ -0.38
EPCAM-203ENST00000419334 TMPRSS5Q9H3S3 457 aa12.68□□□□□ -0.38
EPCAM-203ENST00000419334 CSMD3Q7Z407 3707 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 SERTM2A0A1B0GWG4 89 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 C7orf71A4D174 169 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 CXorf65A6NEN9 183 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 ZNF705GA8MUZ8 300 aaPredicted RBP12.67□□□□□ -0.38
EPCAM-203ENST00000419334 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 NANOS2P60321 138 aaKnown RBP12.67□□□□□ -0.38
EPCAM-203ENST00000419334 SUMO1P63165 101 aaKnown RBP12.67□□□□□ -0.38
EPCAM-203ENST00000419334 PMS2P11Q13670 270 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 ZFAND2AQ8N6M9 145 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 Q8TAT8 98 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 FAM213BQ8TBF2 198 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 RPH3ALQ9UNE2 315 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 LENEPQ9Y5L5 61 aa12.67□□□□□ -0.38
EPCAM-203ENST00000419334 GPX1P07203 203 aa12.66□□□□□ -0.38
EPCAM-203ENST00000419334 GNG5P63218 68 aa12.66□□□□□ -0.38
EPCAM-203ENST00000419334 GOLT1AQ6ZVE7 132 aa12.66□□□□□ -0.38
EPCAM-203ENST00000419334 NIPSNAP3BQ9BS92 247 aa12.66□□□□□ -0.38
EPCAM-203ENST00000419334 CELA1Q9UNI1 258 aa12.66□□□□□ -0.38
EPCAM-203ENST00000419334 TRAV12-3A0A0B4J271 114 aa12.65□□□□□ -0.38
EPCAM-203ENST00000419334 TCRAP04437 139 aa12.65□□□□□ -0.38
EPCAM-203ENST00000419334 PRM2P04554 102 aa12.65□□□□□ -0.38
EPCAM-203ENST00000419334 EMP1P54849 157 aa12.65□□□□□ -0.38
EPCAM-203ENST00000419334 NKX6-2Q9C056 277 aaPredicted RBP12.65□□□□□ -0.38
EPCAM-203ENST00000419334 YTHDF2Q9Y5A9 579 aaKnown RBP12.65□□□□□ -0.38
EPCAM-203ENST00000419334 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 NUPR2A6NF83 97 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 FAM74A7A6NL05 159 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 SPART-AS1P0CW21 52 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 AZU1P20160 251 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 RAB5CP51148 216 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 UBE2G2P60604 165 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 PRR9Q5T870 116 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 PHLDA1Q8WV24 401 aaPredicted RBP12.64□□□□□ -0.39
EPCAM-203ENST00000419334 C16orf74Q96GX8 76 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 PYGO2Q9BRQ0 406 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
EPCAM-203ENST00000419334 K7EQM0 130 aa12.63□□□□□ -0.39
EPCAM-203ENST00000419334 ZNF324O75467 553 aaPredicted RBP12.63□□□□□ -0.39
EPCAM-203ENST00000419334 H2AFB1P0C5Y9 115 aa12.63□□□□□ -0.39
EPCAM-203ENST00000419334 HTN1P15515 57 aa12.63□□□□□ -0.39
EPCAM-203ENST00000419334 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
EPCAM-203ENST00000419334 ZNF493Q6ZR52 646 aa12.63□□□□□ -0.39
EPCAM-203ENST00000419334 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
EPCAM-203ENST00000419334 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
EPCAM-203ENST00000419334 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
EPCAM-203ENST00000419334 PLAC8L1A1L4L8 177 aa12.62□□□□□ -0.39
EPCAM-203ENST00000419334 SULT1A2P50226 295 aa12.62□□□□□ -0.39
EPCAM-203ENST00000419334 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
EPCAM-203ENST00000419334 FAM222AQ5U5X8 452 aa12.62□□□□□ -0.39
EPCAM-203ENST00000419334 CEMP1Q6PRD7 247 aaPredicted RBP12.62□□□□□ -0.39
EPCAM-203ENST00000419334 CYB561D1Q8N8Q1 229 aa12.62□□□□□ -0.39
EPCAM-203ENST00000419334 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
EPCAM-203ENST00000419334 LINC00467Q9BRT7 94 aa12.62□□□□□ -0.39
EPCAM-203ENST00000419334 ATG101Q9BSB4 218 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms