RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PPBPP02775 128 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 LINC00614P0C842 121 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 KRTDAPP60985 99 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 FOXE3Q13461 319 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 C16orf92Q96LL3 132 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ASH1LQ9NR48 2969 aaKnown RBP11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 SPG11Q96JI7 2443 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 PRRC2AP48634 2157 aaKnown RBP11.15□□□□□ -0.62
HLA-DPA1-242ENST00000419277 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.63
HLA-DPA1-242ENST00000419277 CRXO43186 299 aaPredicted RBP11.15□□□□□ -0.63
HLA-DPA1-242ENST00000419277 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.63
HLA-DPA1-242ENST00000419277 PSMB8P28062 276 aa11.15□□□□□ -0.63
HLA-DPA1-242ENST00000419277 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.63
HLA-DPA1-242ENST00000419277 OR4X2Q8NGF9 303 aa11.15□□□□□ -0.63
HLA-DPA1-242ENST00000419277 LINC00477Q96M19 166 aa11.15□□□□□ -0.63
HLA-DPA1-242ENST00000419277 TRAV8-2A0A0B4J237 113 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 TGFAP01135 160 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 AVPP01185 164 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 NTF3P20783 257 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 LYZL1Q6UWQ5 148 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 GPHB5Q86YW7 130 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 Q8TAT8 98 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 U3KQK5 164 aa11.14□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IGHV3OR16-8A0A075B7F1 116 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 PRB1P04280 392 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 BLCAPP62952 87 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 FAM104BQ5XKR9 115 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 C14orf144Q96I85 54 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 PRO1933Q9H354 126 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 PEF1Q9UBV8 284 aaKnown RBP11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 HSPB8Q9UJY1 196 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 UFC1Q9Y3C8 167 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 LRRK2Q5S007 2527 aa11.13□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IGHV7-4-1A0A0J9YVY3 117 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 DEFB112Q30KQ8 113 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 OR10J6PQ8NGY7 276 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 SOCS3O14543 225 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 ORM1P02763 201 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 ELANEP08246 267 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 LURAP1LQ8IV03 231 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
HLA-DPA1-242ENST00000419277 LEPROTL1O95214 131 aa11.11□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IGHV4-31P0DP07 118 aa11.11□□□□□ -0.63
HLA-DPA1-242ENST00000419277 FOSL1P15407 271 aa11.11□□□□□ -0.63
HLA-DPA1-242ENST00000419277 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
HLA-DPA1-242ENST00000419277 Q6YL49 198 aa11.11□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IL17RELQ6ZVW7 336 aa11.11□□□□□ -0.63
HLA-DPA1-242ENST00000419277 FAM208BQ5VWN6 2430 aa11.11□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IGHV1-24A0A0C4DH33 117 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IGHV4-59P01825 116 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 ZNF80P51504 273 aaPredicted RBP11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 CACNG7P62955 275 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 Q8N976 141 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 MIEN1Q9BRT3 115 aa11.1□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IGHV3-66A0A0C4DH42 116 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 C2orf70A6NJV1 201 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 MED14OSP0DP75 135 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 ID1P41134 155 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 Q5PR19 223 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 Q71RC1 249 aaPredicted RBP11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 FA2HQ7L5A8 372 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 RNF152Q8N8N0 203 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 NRGNQ92686 78 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 URB1-AS1Q96HZ7 61 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 SMPXQ9UHP9 88 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 IGHV4-4A0A075B6R2 117 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 TWIST1Q15672 202 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 APRG1Q8IVJ8 170 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 CR1P17927 2039 aa11.09□□□□□ -0.63
HLA-DPA1-242ENST00000419277 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 RNF223E7ERA6 249 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ZNF207O43670 478 aaKnown RBP11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 TRBV12-3P01733 135 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 TMEM86BQ8N661 226 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 PRELID3AQ96N28 172 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 C2orf88Q9BSF0 95 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 RHPN1-AS1Q9BWJ2 59 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms